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Hash: SHA512

Format: 1.0
Source: paleomix
Binary: paleomix
Architecture: amd64
Version: 1.3.8-1
Checksums-Md5:
 5f5fdaf6a3957756e162048d7dfa0362 983864 paleomix_1.3.8-1_amd64.deb
Checksums-Sha1:
 76a9556847a89730b5f6f570cc06488ebb05ca1d 983864 paleomix_1.3.8-1_amd64.deb
Checksums-Sha256:
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Build-Origin: Debian
Build-Architecture: amd64
Build-Kernel-Version: 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01)
Build-Date: Sun, 31 Mar 2024 17:54:57 -1200
Build-Path: /build/reproducible-path/paleomix-1.3.8
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 adduser (= 3.137),
 adwaita-icon-theme (= 46.0-1),
 at-spi2-common (= 2.52.0-1),
 autoconf (= 2.71-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-14),
 autotools-dev (= 20220109.1),
 base-files (= 13),
 base-passwd (= 3.6.3),
 bash (= 5.2.21-2),
 binutils (= 2.42-4),
 binutils-common (= 2.42-4),
 binutils-x86-64-linux-gnu (= 2.42-4),
 bowtie2 (= 2.5.2-1),
 bsdextrautils (= 2.39.3-11),
 bsdutils (= 1:2.39.3-11),
 build-essential (= 12.10),
 bzip2 (= 1.0.8-5.1),
 ca-certificates (= 20240203),
 ca-certificates-java (= 20240118),
 coreutils (= 9.4-3.1),
 cpp (= 4:13.2.0-7),
 cpp-13 (= 13.2.0-23),
 cpp-13-x86-64-linux-gnu (= 13.2.0-23),
 cpp-x86-64-linux-gnu (= 4:13.2.0-7),
 dash (= 0.5.12-6),
 debconf (= 1.5.86),
 debhelper (= 13.15.3),
 debianutils (= 5.17),
 default-jre (= 2:1.17-75),
 default-jre-headless (= 2:1.17-75),
 dh-autoreconf (= 20),
 dh-python (= 6.20240310),
 dh-strip-nondeterminism (= 1.13.1-1),
 diffutils (= 1:3.10-1),
 dpkg (= 1.22.6),
 dpkg-dev (= 1.22.6),
 dwz (= 0.15-1+b1),
 examl (= 3.0.22-4),
 file (= 1:5.45-3),
 findutils (= 4.9.0-5),
 fontconfig (= 2.15.0-1.1),
 fontconfig-config (= 2.15.0-1.1),
 fonts-dejavu-core (= 2.37-8),
 fonts-dejavu-mono (= 2.37-8),
 g++ (= 4:13.2.0-7),
 g++-13 (= 13.2.0-23),
 g++-13-x86-64-linux-gnu (= 13.2.0-23),
 g++-x86-64-linux-gnu (= 4:13.2.0-7),
 gcc (= 4:13.2.0-7),
 gcc-13 (= 13.2.0-23),
 gcc-13-base (= 13.2.0-23),
 gcc-13-x86-64-linux-gnu (= 13.2.0-23),
 gcc-14-base (= 14-20240315-1),
 gcc-x86-64-linux-gnu (= 4:13.2.0-7),
 gettext (= 0.21-14+b1),
 gettext-base (= 0.21-14+b1),
 grep (= 3.11-4),
 groff-base (= 1.23.0-3+b1),
 gtk-update-icon-cache (= 3.24.41-4),
 gzip (= 1.12-1.1),
 hicolor-icon-theme (= 0.17-2),
 hostname (= 3.23+nmu2),
 ibverbs-providers (= 50.0-2+b1),
 init-system-helpers (= 1.66),
 intltool-debian (= 0.35.0+20060710.6),
 java-common (= 0.75),
 libacl1 (= 2.3.2-1),
 libamd-comgr2 (= 6.0+git20231212.4510c28+dfsg-3+b1),
 libamdhip64-5 (= 5.7.1-3),
 libapache-pom-java (= 29-2),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 14-20240315-1),
 libasound2-data (= 1.2.11-1),
 libasound2t64 (= 1.2.11-1+b1),
 libatk1.0-0t64 (= 2.52.0-1),
 libatomic1 (= 14-20240315-1),
 libattr1 (= 1:2.5.2-1),
 libaudit-common (= 1:3.1.2-2.1),
 libaudit1 (= 1:3.1.2-2.1),
 libavahi-client3 (= 0.8-13+b2),
 libavahi-common-data (= 0.8-13+b2),
 libavahi-common3 (= 0.8-13+b2),
 libbarclay-java (= 5.0.0+dfsg-1),
 libbinutils (= 2.42-4),
 libblkid1 (= 2.39.3-11),
 libbrotli1 (= 1.1.0-2+b3),
 libbsd0 (= 0.12.2-1),
 libbz2-1.0 (= 1.0.8-5.1),
 libc-bin (= 2.37-15.1),
 libc-dev-bin (= 2.37-15.1),
 libc6 (= 2.37-15.1),
 libc6-dev (= 2.37-15.1),
 libcairo2 (= 1.18.0-3),
 libcap-ng0 (= 0.8.4-2),
 libcap2 (= 1:2.66-5),
 libcbor0.10 (= 0.10.2-1.2),
 libcc1-0 (= 14-20240315-1),
 libcom-err2 (= 1.47.0-2.4),
 libcommons-codec-java (= 1.16.0-1),
 libcommons-compress-java (= 1.25.0-1),
 libcommons-io-java (= 2.11.0-2),
 libcommons-jexl2-java (= 2.1.1-6),
 libcommons-lang3-java (= 3.14.0-1),
 libcommons-logging-java (= 1.3.0-1),
 libcommons-math3-java (= 3.6.1-3),
 libcommons-parent-java (= 56-1),
 libcrypt-dev (= 1:4.4.36-4),
 libcrypt1 (= 1:4.4.36-4),
 libctf-nobfd0 (= 2.42-4),
 libctf0 (= 2.42-4),
 libcups2t64 (= 2.4.7-1.2+b1),
 libcurl3t64-gnutls (= 8.7.1-1),
 libdatrie1 (= 0.2.13-3),
 libdb5.3t64 (= 5.3.28+dfsg2-6),
 libdbus-1-3 (= 1.14.10-4+b1),
 libdebconfclient0 (= 0.271+b3),
 libdebhelper-perl (= 13.15.3),
 libdeflate0 (= 1.20-1),
 libdpkg-perl (= 1.22.6),
 libdrm-amdgpu1 (= 2.4.120-2),
 libdrm-common (= 2.4.120-2),
 libdrm-intel1 (= 2.4.120-2),
 libdrm-nouveau2 (= 2.4.120-2),
 libdrm-radeon1 (= 2.4.120-2),
 libdrm2 (= 2.4.120-2),
 libedit2 (= 3.1-20230828-1),
 libelf1t64 (= 0.191-1),
 libevent-core-2.1-7t64 (= 2.1.12-stable-8.1+b1),
 libevent-pthreads-2.1-7t64 (= 2.1.12-stable-8.1+b1),
 libexpat1 (= 2.6.2-1),
 libfabric1 (= 1.17.0-3+b1),
 libffi8 (= 3.4.6-1),
 libfido2-1 (= 1.14.0-1+b1),
 libfile-stripnondeterminism-perl (= 1.13.1-1),
 libfontconfig1 (= 2.15.0-1.1),
 libfreemarker-java (= 2.3.32-2),
 libfreetype6 (= 2.13.2+dfsg-1+b2),
 libfribidi0 (= 1.0.13-3+b1),
 libgatk-native-bindings-java (= 1.0.0+dfsg-2),
 libgcc-13-dev (= 13.2.0-23),
 libgcc-s1 (= 14-20240315-1),
 libgcrypt20 (= 1.10.3-2),
 libgdbm-compat4t64 (= 1.23-5.1+b1),
 libgdbm6t64 (= 1.23-5.1+b1),
 libgdk-pixbuf-2.0-0 (= 2.42.10+dfsg-3+b2),
 libgdk-pixbuf2.0-common (= 2.42.10+dfsg-3),
 libgif7 (= 5.2.2-1),
 libgkl-java (= 0.8.11+dfsg-2),
 libgl1 (= 1.7.0-1),
 libgl1-mesa-dri (= 24.0.4-1),
 libglapi-mesa (= 24.0.4-1),
 libglib2.0-0t64 (= 2.78.4-6),
 libglvnd0 (= 1.7.0-1),
 libglx-mesa0 (= 24.0.4-1),
 libglx0 (= 1.7.0-1),
 libgmp10 (= 2:6.3.0+dfsg-2+b1),
 libgnutls30t64 (= 3.8.4-2),
 libgomp1 (= 14-20240315-1),
 libgoogle-gson-java (= 2.10.1-1),
 libgpg-error0 (= 1.47-3),
 libgprofng0 (= 2.42-4),
 libgraphite2-3 (= 1.3.14-2),
 libgssapi-krb5-2 (= 1.20.1-6+b1),
 libgtk2.0-0t64 (= 2.24.33-4),
 libgtk2.0-common (= 2.24.33-4),
 libharfbuzz0b (= 8.3.0-2+b1),
 libhogweed6t64 (= 3.9.1-2.2),
 libhsa-runtime64-1 (= 5.7.1-2),
 libhsakmt1 (= 5.7.0-1),
 libhts3t64 (= 1.19+ds-1.1+b1),
 libhtscodecs2 (= 1.6.0-1+b1),
 libhtsjdk-java (= 4.1.0+dfsg-1),
 libhttpclient-java (= 4.5.14-1),
 libhttpcore-java (= 4.4.16-1),
 libhwasan0 (= 14-20240315-1),
 libhwloc-plugins (= 2.10.0-1+b1),
 libhwloc15 (= 2.10.0-1+b1),
 libibverbs1 (= 50.0-2+b1),
 libicu72 (= 72.1-4+b1),
 libidn2-0 (= 2.3.7-2),
 libisl23 (= 0.26-3+b2),
 libitm1 (= 14-20240315-1),
 libjansson4 (= 2.14-2+b2),
 libjbig0 (= 2.1-6.1+b1),
 libjoptsimple-java (= 5.0.4-4),
 libjpeg62-turbo (= 1:2.1.5-2+b2),
 libk5crypto3 (= 1.20.1-6+b1),
 libkeyutils1 (= 1.6.3-3),
 libkrb5-3 (= 1.20.1-6+b1),
 libkrb5support0 (= 1.20.1-6+b1),
 liblcms2-2 (= 2.14-2+b1),
 libldap-2.5-0 (= 2.5.16+dfsg-2),
 liblerc4 (= 4.0.0+ds-4+b1),
 liblightcouch-java (= 0.2.0-1),
 libllvm17t64 (= 1:17.0.6-9),
 liblog4j2-java (= 2.19.0-2),
 liblsan0 (= 14-20240315-1),
 liblz4-1 (= 1.9.4-1+b2),
 liblzma5 (= 5.6.1+really5.4.5-1),
 libmagic-mgc (= 1:5.45-3),
 libmagic1t64 (= 1:5.45-3),
 libmbedcrypto7t64 (= 2.28.8-1),
 libmbedtls14t64 (= 2.28.8-1),
 libmbedx509-1t64 (= 2.28.8-1),
 libmd0 (= 1.1.0-2),
 libmjson-java (= 1.4.0-3),
 libmongodb-java (= 3.6.3-2),
 libmount1 (= 2.39.3-11),
 libmpc3 (= 1.3.1-1+b2),
 libmpfr6 (= 4.2.1-1+b1),
 libmunge2 (= 0.5.15-4),
 libncbi-ngs3 (= 3.0.3+dfsg-6+b1),
 libncbi-vdb3 (= 3.0.2+dfsg-2+b1),
 libncursesw6 (= 6.4+20240113-1),
 libnettle8t64 (= 3.9.1-2.2),
 libnghttp2-14 (= 1.60.0-1),
 libngs-java (= 3.0.3+dfsg-6+b1),
 libngs-jni (= 3.0.3+dfsg-6+b1),
 libnl-3-200 (= 3.7.0-0.3),
 libnl-route-3-200 (= 3.7.0-0.3),
 libnspr4 (= 2:4.35-1.1+b1),
 libnss3 (= 2:3.99-1),
 libnuma1 (= 2.0.18-1),
 libopenmpi3t64 (= 4.1.6-7),
 libp11-kit0 (= 0.25.3-4),
 libpam-modules (= 1.5.3-6),
 libpam-modules-bin (= 1.5.3-6),
 libpam-runtime (= 1.5.3-6),
 libpam0g (= 1.5.3-6),
 libpango-1.0-0 (= 1.52.1+ds-1),
 libpangocairo-1.0-0 (= 1.52.1+ds-1),
 libpangoft2-1.0-0 (= 1.52.1+ds-1),
 libpciaccess0 (= 0.17-3),
 libpcre2-8-0 (= 10.42-4+b1),
 libpcsclite1 (= 2.0.3-1),
 libperl5.38t64 (= 5.38.2-3.2),
 libpicard-java (= 3.1.1+dfsg-1),
 libpipeline1 (= 1.5.7-2),
 libpixman-1-0 (= 0.42.2-1+b1),
 libpmix2t64 (= 5.0.2-1.1),
 libpng16-16t64 (= 1.6.43-5),
 libpopt0 (= 1.19+dfsg-1+b1),
 libpsl5t64 (= 0.21.2-1.1),
 libpsm-infinipath1 (= 3.3+20.604758e7-6.3),
 libpsm2-2 (= 11.2.185-2),
 libpython3-stdlib (= 3.11.8-1),
 libpython3.11-minimal (= 3.11.8-3+b2),
 libpython3.11-stdlib (= 3.11.8-3+b2),
 libquadmath0 (= 14-20240315-1),
 librdmacm1t64 (= 50.0-2+b1),
 libreadline8t64 (= 8.2-4),
 librhino-java (= 1.7.14-2.1),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b3),
 libsasl2-2 (= 2.1.28+dfsg1-6),
 libsasl2-modules-db (= 2.1.28+dfsg1-6),
 libseccomp2 (= 2.5.5-1),
 libselinux1 (= 3.5-2+b1),
 libsemanage-common (= 3.5-1),
 libsemanage2 (= 3.5-1+b3),
 libsensors-config (= 1:3.6.0-9),
 libsensors5 (= 1:3.6.0-9),
 libsepol2 (= 3.5-2),
 libsframe1 (= 2.42-4),
 libsharpyuv0 (= 1.3.2-0.4+b1),
 libslf4j-java (= 1.7.32-1),
 libsmartcols1 (= 2.39.3-11),
 libsnappy-java (= 1.1.10.5-1),
 libsnappy-jni (= 1.1.10.5-1),
 libsnappy1v5 (= 1.1.10-1+b1),
 libsqlite3-0 (= 3.45.2-1),
 libssh2-1t64 (= 1.11.0-4.1+b1),
 libssl3t64 (= 3.1.5-1.1),
 libstdc++-13-dev (= 13.2.0-23),
 libstdc++6 (= 14-20240315-1),
 libsub-override-perl (= 0.10-1),
 libsystemd0 (= 255.4-1+b1),
 libtasn1-6 (= 4.19.0-3+b2),
 libthai-data (= 0.1.29-2),
 libthai0 (= 0.1.29-2),
 libtiff6 (= 4.5.1+git230720-4),
 libtinfo6 (= 6.4+20240113-1),
 libtool (= 2.4.7-7),
 libtsan2 (= 14-20240315-1),
 libubsan1 (= 14-20240315-1),
 libuchardet0 (= 0.0.8-1+b1),
 libucx0 (= 1.16.0+ds-5),
 libudev1 (= 255.4-1+b1),
 libunistring5 (= 1.2-1),
 libuuid1 (= 2.39.3-11),
 libvulkan1 (= 1.3.275.0-1),
 libwebp7 (= 1.3.2-0.4+b1),
 libx11-6 (= 2:1.8.7-1),
 libx11-data (= 2:1.8.7-1),
 libx11-xcb1 (= 2:1.8.7-1),
 libxau6 (= 1:1.0.9-1),
 libxcb-dri2-0 (= 1.15-1),
 libxcb-dri3-0 (= 1.15-1),
 libxcb-glx0 (= 1.15-1),
 libxcb-present0 (= 1.15-1),
 libxcb-randr0 (= 1.15-1),
 libxcb-render0 (= 1.15-1),
 libxcb-shm0 (= 1.15-1),
 libxcb-sync1 (= 1.15-1),
 libxcb-xfixes0 (= 1.15-1),
 libxcb1 (= 1.15-1),
 libxcomposite1 (= 1:0.4.5-1),
 libxcursor1 (= 1:1.2.1-1),
 libxdamage1 (= 1:1.1.6-1),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.4-1+b1),
 libxfixes3 (= 1:6.0.0-2),
 libxi6 (= 2:1.8.1-1),
 libxinerama1 (= 2:1.1.4-3),
 libxml2 (= 2.9.14+dfsg-1.3+b2),
 libxnvctrl0 (= 535.171.04-1),
 libxrandr2 (= 2:1.5.4-1),
 libxrender1 (= 1:0.9.10-1.1),
 libxshmfence1 (= 1.3-1),
 libxtst6 (= 2:1.2.3-1.1),
 libxxf86vm1 (= 1:1.1.4-1+b2),
 libxxhash0 (= 0.8.2-2+b1),
 libz3-4 (= 4.8.12-3.1+b2),
 libzstd1 (= 1.5.5+dfsg2-2),
 linux-libc-dev (= 6.7.9-2),
 login (= 1:4.13+dfsg1-4),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1),
 man-db (= 2.12.0-4),
 mawk (= 1.3.4.20240123-1),
 media-types (= 10.1.0),
 ncbi-vdb-data (= 3.0.2+dfsg-2),
 ncurses-base (= 6.4+20240113-1),
 ncurses-bin (= 6.4+20240113-1),
 netbase (= 6.4),
 ocl-icd-libopencl1 (= 2.3.2-1),
 openjdk-17-jre (= 17.0.11~7ea-1),
 openjdk-17-jre-headless (= 17.0.11~7ea-1),
 openmpi-bin (= 4.1.6-7),
 openmpi-common (= 4.1.6-7),
 openssh-client (= 1:9.7p1-3),
 openssl (= 3.1.5-1.1),
 passwd (= 1:4.13+dfsg1-4),
 patch (= 2.7.6-7),
 perl (= 5.38.2-3.2),
 perl-base (= 5.38.2-3.2),
 perl-modules-5.38 (= 5.38.2-3.2),
 picard-tools (= 3.1.1+dfsg-1),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.11.8-1),
 python3-coloredlogs (= 15.0.1-1),
 python3-configargparse (= 1.7-1),
 python3-distutils (= 3.12.2-3),
 python3-humanfriendly (= 10.0-5),
 python3-iniconfig (= 1.1.1-2),
 python3-lib2to3 (= 3.12.2-3),
 python3-minimal (= 3.11.8-1),
 python3-packaging (= 23.2-1),
 python3-pkg-resources (= 68.1.2-2),
 python3-pluggy (= 1.4.0-1),
 python3-pysam (= 0.22.0+ds-1+b2),
 python3-pytest (= 8.1.1-1),
 python3-ruamel.yaml (= 0.17.21-1),
 python3-ruamel.yaml.clib (= 0.2.8-1),
 python3-setproctitle (= 1.3.3-1+b1),
 python3-setuptools (= 68.1.2-2),
 python3.11 (= 3.11.8-3+b2),
 python3.11-minimal (= 3.11.8-3+b2),
 readline-common (= 8.2-4),
 rpcsvc-proto (= 1.4.3-1),
 rsync (= 3.2.7-1+b2),
 sed (= 4.9-2),
 sensible-utils (= 0.0.22),
 shared-mime-info (= 2.4-3),
 sysvinit-utils (= 3.08-7),
 tar (= 1.35+dfsg-3),
 tzdata (= 2024a-1),
 usr-is-merged (= 39),
 util-linux (= 2.39.3-11),
 x11-common (= 1:7.7+23),
 xz-utils (= 5.6.1+really5.4.5-1),
 zlib1g (= 1:1.3.dfsg-3.1)
Environment:
 DEB_BUILD_OPTIONS="buildinfo=+all reproducible=+all parallel=20 "
 LANG="C"
 LC_ALL="C"
 SOURCE_DATE_EPOCH="1686519422"
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