Format: 1.0
Source: python-biopython
Binary: python-biopython-doc python3-biopython python3-biopython-dbgsym python3-biopython-sql
Architecture: all amd64
Version: 1.79+dfsg-3
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Build-Origin: Debian
Build-Architecture: amd64
Build-Kernel-Version: 5.16.0-0.bpo.4-amd64 #1 SMP PREEMPT Debian 5.16.12-1~bpo11+1 (2022-03-08)
Build-Date: Wed, 28 Jun 2023 19:47:35 +1400
Build-Path: /build/python-biopython-1.79+dfsg
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 adduser (= 3.121),
 autoconf (= 2.71-2),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-6),
 autotools-dev (= 20220109.1),
 base-files (= 12.2),
 base-passwd (= 3.5.52),
 bash (= 5.1-6+b1),
 binutils (= 2.38-4),
 binutils-common (= 2.38-4),
 binutils-x86-64-linux-gnu (= 2.38-4),
 blt (= 2.5.3+dfsg-4.1),
 bsdextrautils (= 2.38-4),
 bsdutils (= 1:2.38-4),
 build-essential (= 12.9),
 bwa (= 0.7.17-7),
 bzip2 (= 1.0.8-5),
 clustalo (= 1.2.4-7),
 clustalw (= 2.1+lgpl-7),
 coreutils (= 8.32-4.1),
 cpp (= 4:11.2.0-2),
 cpp-11 (= 11.3.0-3),
 dash (= 0.5.11+git20210903+057cd650a4ed-8),
 debconf (= 1.5.79),
 debhelper (= 13.7.1),
 debianutils (= 5.7-0.2),
 dh-autoreconf (= 20),
 dh-python (= 5.20220403),
 dh-strip-nondeterminism (= 1.13.0-1),
 dialign (= 2.2.1-11),
 diffutils (= 1:3.7-5),
 dpkg (= 1.21.7),
 dpkg-dev (= 1.21.7),
 dssp (= 4.0.4-1),
 dwz (= 0.14-1),
 emboss (= 6.6.0+dfsg-11),
 emboss-data (= 6.6.0+dfsg-11),
 emboss-lib (= 6.6.0+dfsg-11),
 fasttree (= 2.1.11-2),
 file (= 1:5.41-4),
 findutils (= 4.9.0-3),
 flex (= 2.6.4-8),
 fontconfig-config (= 2.13.1-4.4),
 fonts-dejavu-core (= 2.37-2),
 fonts-lmodern (= 2.005-1),
 fonts-lyx (= 2.3.6-1),
 fonts-urw-base35 (= 20200910-1),
 g++ (= 4:11.2.0-2),
 g++-11 (= 11.3.0-3),
 gcc (= 4:11.2.0-2),
 gcc-11 (= 11.3.0-3),
 gcc-11-base (= 11.3.0-3),
 gcc-12-base (= 12.1.0-2),
 gettext (= 0.21-6),
 gettext-base (= 0.21-6),
 ghostscript (= 9.56.1~dfsg-1),
 grep (= 3.7-1),
 groff-base (= 1.22.4-8),
 gzip (= 1.12-1),
 hevea (= 2.35-1+b1),
 hostname (= 3.23),
 ibverbs-providers (= 40.0-1),
 init-system-helpers (= 1.62),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.3.1-1),
 libapache-pom-java (= 18-1),
 libarchive-zip-perl (= 1.68-1),
 libargtable2-0 (= 13-1.1),
 libasan6 (= 11.3.0-3),
 libatomic1 (= 12.1.0-2),
 libattr1 (= 1:2.5.1-1),
 libaudit-common (= 1:3.0.7-1),
 libaudit1 (= 1:3.0.7-1+b1),
 libavahi-client3 (= 0.8-5),
 libavahi-common-data (= 0.8-5),
 libavahi-common3 (= 0.8-5),
 libbinutils (= 2.38-4),
 libblas3 (= 3.10.1-2),
 libblkid1 (= 2.38-4),
 libboost-iostreams1.74.0 (= 1.74.0-14+b1),
 libboost-program-options1.74.0 (= 1.74.0-14+b1),
 libboost-regex1.74.0 (= 1.74.0-14+b1),
 libbrotli1 (= 1.0.9-2+b3),
 libbsd0 (= 0.11.6-1),
 libbz2-1.0 (= 1.0.8-5),
 libc-bin (= 2.33-7),
 libc-dev-bin (= 2.33-7),
 libc6 (= 2.33-7),
 libc6-dev (= 2.33-7),
 libcairo2 (= 1.16.0-5),
 libcap-ng0 (= 0.7.9-2.2+b2),
 libcap2 (= 1:2.44-1),
 libcbor0.8 (= 0.8.0-2),
 libcc1-0 (= 12.1.0-2),
 libcifpp-data (= 2.0.5-1),
 libcifpp2 (= 2.0.5-1+b1),
 libcom-err2 (= 1.46.5-2),
 libcommons-logging-java (= 1.2-3),
 libcommons-parent-java (= 43-1),
 libcrypt-dev (= 1:4.4.27-1.1),
 libcrypt1 (= 1:4.4.27-1.1),
 libctf-nobfd0 (= 2.38-4),
 libctf0 (= 2.38-4),
 libcups2 (= 2.4.1op1-2),
 libcurl3-gnutls (= 7.83.0-1),
 libdb5.3 (= 5.3.28+dfsg1-0.9),
 libdbus-1-3 (= 1.14.0-1),
 libdebconfclient0 (= 0.262),
 libdebhelper-perl (= 13.7.1),
 libdeflate0 (= 1.10-2),
 libdpkg-perl (= 1.21.7),
 libedit2 (= 3.1-20210910-1),
 libelf1 (= 0.187-1),
 libevent-core-2.1-7 (= 2.1.12-stable-5),
 libevent-pthreads-2.1-7 (= 2.1.12-stable-5),
 libexpat1 (= 2.4.8-1),
 libexpat1-dev (= 2.4.8-1),
 libfabric1 (= 1.11.0-3),
 libffi8 (= 3.4.2-4),
 libfido2-1 (= 1.10.0-1),
 libfile-stripnondeterminism-perl (= 1.13.0-1),
 libfontbox-java (= 1:1.8.16-2),
 libfontconfig1 (= 2.13.1-4.4),
 libfreetype6 (= 2.12.1+dfsg-2),
 libfribidi0 (= 1.0.8-2.1),
 libgcc-11-dev (= 11.3.0-3),
 libgcc-s1 (= 12.1.0-2),
 libgcrypt20 (= 1.10.1-2),
 libgd3 (= 2.3.0-2+b1),
 libgdbm-compat4 (= 1.23-1),
 libgdbm6 (= 1.23-1),
 libgfortran5 (= 12.1.0-2),
 libglib2.0-0 (= 2.72.1-1),
 libgmp10 (= 2:6.2.1+dfsg-3),
 libgnutls30 (= 3.7.4-2),
 libgomp1 (= 12.1.0-2),
 libgpg-error0 (= 1.45-2),
 libgraphite2-3 (= 1.3.14-1),
 libgs9 (= 9.56.1~dfsg-1),
 libgs9-common (= 9.56.1~dfsg-1),
 libgssapi-krb5-2 (= 1.19.2-2+b1),
 libharfbuzz0b (= 2.7.4-1+b1),
 libhogweed6 (= 3.7.3-1),
 libhpdf-2.3.0 (= 2.3.0+dfsg-1+b1),
 libhts3 (= 1.13+ds-2),
 libhtscodecs2 (= 1.2.1-1),
 libhwloc-plugins (= 2.7.1-1),
 libhwloc15 (= 2.7.1-1),
 libibverbs1 (= 40.0-1),
 libice6 (= 2:1.0.10-1),
 libicu71 (= 71.1-3),
 libidn12 (= 1.38-4),
 libidn2-0 (= 2.3.2-2),
 libijs-0.35 (= 0.35-15),
 libimagequant0 (= 2.17.0-1),
 libisl23 (= 0.24-2),
 libitm1 (= 12.1.0-2),
 libjbig0 (= 2.1-3.1+b2),
 libjbig2dec0 (= 0.19-3),
 libjpeg62-turbo (= 1:2.1.2-1),
 libjs-jquery (= 3.6.0+dfsg+~3.5.13-1),
 libjs-jquery-ui (= 1.13.1+dfsg-1),
 libjs-sphinxdoc (= 4.5.0-3),
 libjs-underscore (= 1.13.3~dfsg+~1.11.4-1),
 libk5crypto3 (= 1.19.2-2+b1),
 libkeyutils1 (= 1.6.1-3),
 libkpathsea6 (= 2021.20210626.59705-1+b1),
 libkrb5-3 (= 1.19.2-2+b1),
 libkrb5support0 (= 1.19.2-2+b1),
 liblapack3 (= 3.10.1-2),
 liblbfgsb0 (= 3.0+dfsg.3-10),
 liblcms2-2 (= 2.12~rc1-2),
 libldap-2.5-0 (= 2.5.11+dfsg-1),
 liblmdb0 (= 0.9.24-1),
 liblsan0 (= 12.1.0-2),
 liblz4-1 (= 1.9.3-2),
 liblzma5 (= 5.2.5-2.1),
 libmagic-mgc (= 1:5.41-4),
 libmagic1 (= 1:5.41-4),
 libmariadb3 (= 1:10.6.7-3),
 libmbedcrypto7 (= 2.28.0-2),
 libmbedtls14 (= 2.28.0-2),
 libmbedx509-1 (= 2.28.0-2),
 libmd0 (= 1.0.4-1),
 libmount1 (= 2.38-4),
 libmpc3 (= 1.2.1-2),
 libmpdec3 (= 2.5.1-2),
 libmpfr6 (= 4.1.0-3),
 libncurses6 (= 6.3+20220423-2),
 libncursesw6 (= 6.3+20220423-2),
 libnetpbm11 (= 2:10.97.00-2),
 libnettle8 (= 3.7.3-1),
 libnghttp2-14 (= 1.47.0-1),
 libnl-3-200 (= 3.5.0-0.1),
 libnl-route-3-200 (= 3.5.0-0.1),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libnuma1 (= 2.0.14-3),
 libopenjp2-7 (= 2.4.0-6),
 libopenmpi3 (= 4.1.3-2),
 libp11-kit0 (= 0.24.1-1),
 libpam-modules (= 1.4.0-13),
 libpam-modules-bin (= 1.4.0-13),
 libpam-runtime (= 1.4.0-13),
 libpam0g (= 1.4.0-13),
 libpaper-utils (= 1.1.28+b1),
 libpaper1 (= 1.1.28+b1),
 libpciaccess0 (= 0.16-3),
 libpcre2-8-0 (= 10.40-1),
 libpcre3 (= 2:8.39-14),
 libpdfbox-java (= 1:1.8.16-2),
 libperl5.34 (= 5.34.0-4),
 libpipeline1 (= 1.5.6-1),
 libpixman-1-0 (= 0.40.0-1),
 libpmix2 (= 4.1.2-2),
 libpng16-16 (= 1.6.37-5),
 libpq5 (= 14.3-1),
 libpsl5 (= 0.21.0-1.2),
 libpsm-infinipath1 (= 3.3+20.604758e7-6.1),
 libpsm2-2 (= 11.2.185-1),
 libptexenc1 (= 2021.20210626.59705-1+b1),
 libpython3-all-dev (= 3.10.4-1+b1),
 libpython3-dev (= 3.10.4-1+b1),
 libpython3-stdlib (= 3.10.4-1+b1),
 libpython3.10 (= 3.10.4-1),
 libpython3.10-dev (= 3.10.4-1),
 libpython3.10-minimal (= 3.10.4-1),
 libpython3.10-stdlib (= 3.10.4-1),
 libpython3.9 (= 3.9.12-1),
 libpython3.9-dev (= 3.9.12-1),
 libpython3.9-minimal (= 3.9.12-1),
 libpython3.9-stdlib (= 3.9.12-1),
 libqhull-r8.0 (= 2020.2-4),
 libquadmath0 (= 12.1.0-2),
 libraqm0 (= 0.7.0-4),
 librdmacm1 (= 40.0-1),
 libreadline8 (= 8.1.2-1.2),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
 libsasl2-2 (= 2.1.28+dfsg-4),
 libsasl2-modules-db (= 2.1.28+dfsg-4),
 libseccomp2 (= 2.5.4-1),
 libselinux1 (= 3.3-1+b2),
 libsemanage-common (= 3.3-1),
 libsemanage2 (= 3.3-1+b2),
 libsepol2 (= 3.3-1),
 libsigsegv2 (= 2.14-1),
 libsm6 (= 2:1.2.3-1),
 libsmartcols1 (= 2.38-4),
 libsqlite3-0 (= 3.38.5-1),
 libssh2-1 (= 1.10.0-3),
 libssl1.1 (= 1.1.1o-1),
 libstdc++-11-dev (= 11.3.0-3),
 libstdc++6 (= 12.1.0-2),
 libsub-override-perl (= 0.09-2),
 libsynctex2 (= 2021.20210626.59705-1+b1),
 libsystemd0 (= 250.4-1),
 libtasn1-6 (= 4.18.0-4),
 libtcl8.6 (= 8.6.12+dfsg-1),
 libteckit0 (= 2.5.11+ds1-1),
 libtexlua53 (= 2021.20210626.59705-1+b1),
 libtexluajit2 (= 2021.20210626.59705-1+b1),
 libtiff5 (= 4.3.0-8),
 libtinfo6 (= 6.3+20220423-2),
 libtirpc-common (= 1.3.2-2),
 libtirpc-dev (= 1.3.2-2),
 libtirpc3 (= 1.3.2-2),
 libtk8.6 (= 8.6.12-1),
 libtool (= 2.4.7-4),
 libtsan0 (= 11.3.0-3),
 libubsan1 (= 12.1.0-2),
 libuchardet0 (= 0.0.7-1),
 libucx0 (= 1.12.1-1),
 libudev1 (= 250.4-1),
 libunistring2 (= 1.0-1),
 libuuid1 (= 2.38-4),
 libwebp7 (= 1.2.2-2+b1),
 libwebpdemux2 (= 1.2.2-2+b1),
 libwebpmux3 (= 1.2.2-2+b1),
 libx11-6 (= 2:1.7.5-1),
 libx11-data (= 2:1.7.5-1),
 libxau6 (= 1:1.0.9-1),
 libxaw7 (= 2:1.0.14-1),
 libxcb-render0 (= 1.14-3),
 libxcb-shm0 (= 1.14-3),
 libxcb1 (= 1.14-3),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.4-1),
 libxft2 (= 2.3.4-1),
 libxi6 (= 2:1.8-1),
 libxml2 (= 2.9.14+dfsg-1),
 libxmu6 (= 2:1.1.3-3),
 libxnvctrl0 (= 470.103.01-2),
 libxpm4 (= 1:3.5.12-1),
 libxrender1 (= 1:0.9.10-1),
 libxslt1.1 (= 1.1.34-4),
 libxss1 (= 1:1.2.3-1),
 libxt6 (= 1:1.2.1-1),
 libzstd1 (= 1.5.2+dfsg-1),
 libzzip-0-13 (= 0.13.72+dfsg.1-1.1),
 linux-libc-dev (= 5.17.3-1),
 login (= 1:4.11.1+dfsg1-2),
 lsb-base (= 11.1.0),
 m4 (= 1.4.18-5),
 mafft (= 7.490-1),
 mailcap (= 3.70+nmu1),
 make (= 4.3-4.1),
 man-db (= 2.10.2-1),
 mariadb-common (= 1:10.6.7-3),
 mawk (= 1.3.4.20200120-3+b1),
 media-types (= 8.0.0),
 mime-support (= 3.66),
 muscle (= 1:5.1-1),
 mysql-common (= 5.8+1.0.8),
 ncbi-blast+ (= 2.12.0+ds-3+b1),
 ncbi-data (= 6.1.20170106+dfsg1-9),
 ncurses-base (= 6.3+20220423-2),
 ncurses-bin (= 6.3+20220423-2),
 netpbm (= 2:10.97.00-2),
 ocl-icd-libopencl1 (= 2.2.14-3),
 openmpi-bin (= 4.1.3-2),
 openmpi-common (= 4.1.3-2),
 openssh-client (= 1:9.0p1-1),
 passwd (= 1:4.11.1+dfsg1-2),
 patch (= 2.7.6-7),
 perl (= 5.34.0-4),
 perl-base (= 5.34.0-4),
 perl-modules-5.34 (= 5.34.0-4),
 phylip (= 1:3.697+dfsg-2),
 phyml (= 3:3.3.20220408-1),
 po-debconf (= 1.0.21+nmu1),
 poppler-data (= 0.4.11-1),
 prank (= 0.0.170427+dfsg-3),
 preview-latex-style (= 12.2-1),
 probcons (= 1.12-14),
 python-matplotlib-data (= 3.5.1-2),
 python3 (= 3.10.4-1+b1),
 python3-all (= 3.10.4-1+b1),
 python3-all-dev (= 3.10.4-1+b1),
 python3-appdirs (= 1.4.4-2),
 python3-attr (= 21.2.0-1),
 python3-brotli (= 1.0.9-2+b3),
 python3-cycler (= 0.11.0-1),
 python3-dateutil (= 2.8.1-6),
 python3-decorator (= 4.4.2-2),
 python3-dev (= 3.10.4-1+b1),
 python3-distutils (= 3.9.12-1),
 python3-fonttools (= 4.32.0-1),
 python3-fs (= 2.4.12-1),
 python3-isodate (= 0.6.1-1),
 python3-kiwisolver (= 1.3.2-1+b1),
 python3-lib2to3 (= 3.9.12-1),
 python3-lxml (= 4.8.0-1),
 python3-lz4 (= 4.0.0+dfsg-1),
 python3-matplotlib (= 3.5.1-2+b1),
 python3-minimal (= 3.10.4-1+b1),
 python3-mmtf (= 1.1.2-3),
 python3-mpmath (= 1.2.1-2),
 python3-msgpack (= 1.0.3-1),
 python3-mysqldb (= 1.4.6-1+b1),
 python3-networkx (= 2.5+ds-2),
 python3-numpy (= 1:1.21.5-1),
 python3-packaging (= 21.3-1),
 python3-pil (= 9.0.1-1),
 python3-pil.imagetk (= 9.0.1-1),
 python3-pkg-resources (= 59.6.0-1.2),
 python3-psycopg2 (= 2.9.2-1),
 python3-pygments (= 2.11.2+dfsg-2),
 python3-pyparsing (= 3.0.7-2),
 python3-rdflib (= 6.1.1-1),
 python3-renderpm (= 3.6.8-1),
 python3-reportlab (= 3.6.8-1),
 python3-reportlab-accel (= 3.6.8-1),
 python3-scipy (= 1.7.3-2),
 python3-setuptools (= 59.6.0-1.2),
 python3-six (= 1.16.0-3),
 python3-sympy (= 1.10.1-3),
 python3-tk (= 3.9.12-1),
 python3-tz (= 2022.1-1),
 python3-ufolib2 (= 0.13.1+dfsg1-1),
 python3-unicodedata2 (= 14.0.0+ds-8),
 python3-unittest2 (= 1.1.0-9),
 python3.10 (= 3.10.4-1),
 python3.10-dev (= 3.10.4-1),
 python3.10-minimal (= 3.10.4-1),
 python3.9 (= 3.9.12-1),
 python3.9-dev (= 3.9.12-1),
 python3.9-minimal (= 3.9.12-1),
 raxml (= 8.2.12+dfsg-8),
 readline-common (= 8.1.2-1.2),
 rpcsvc-proto (= 1.4.2-4),
 samtools (= 1.13-4),
 sed (= 4.8-1),
 sensible-utils (= 0.0.17),
 sysvinit-utils (= 3.03-1),
 t-coffee (= 13.41.0.28bdc39+dfsg-4),
 t1utils (= 1.41-4),
 tar (= 1.34+dfsg-1),
 tex-common (= 6.17),
 texlive-base (= 2021.20220204-1),
 texlive-binaries (= 2021.20210626.59705-1+b1),
 texlive-fonts-recommended (= 2021.20220204-1),
 texlive-latex-base (= 2021.20220204-1),
 texlive-latex-extra (= 2021.20220204-1),
 texlive-latex-recommended (= 2021.20220204-1),
 texlive-pictures (= 2021.20220204-1),
 tk8.6-blt2.5 (= 2.5.3+dfsg-4.1),
 tzdata (= 2022a-1),
 ucf (= 3.0043),
 unicode-data (= 14.0.0-1.1),
 util-linux (= 2.38-4),
 util-linux-extra (= 2.38-4),
 wise (= 2.4.1-23),
 wise-data (= 2.4.1-23),
 x11-common (= 1:7.7+23),
 xdg-utils (= 1.1.3-4.1),
 xz-utils (= 5.2.5-2.1),
 zlib1g (= 1:1.2.11.dfsg-4),
 zlib1g-dev (= 1:1.2.11.dfsg-4)
Environment:
 DEB_BUILD_OPTIONS="buildinfo=+all reproducible=+all parallel=16"
 LANG="C"
 LC_ALL="C"
 SOURCE_DATE_EPOCH="1646490972"