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Format: 1.0
Source: paleomix
Binary: paleomix
Architecture: amd64
Version: 1.3.7-2
Checksums-Md5:
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Build-Origin: Debian
Build-Architecture: amd64
Build-Kernel-Version: 5.10.0-20-amd64 #1 SMP Debian 5.10.158-2 (2022-12-13)
Build-Date: Sat, 31 Dec 2022 11:25:01 -1200
Build-Path: /build/1st/paleomix-1.3.7
Installed-Build-Depends:
 adduser (= 3.130),
 adwaita-icon-theme (= 43-1),
 at-spi2-common (= 2.46.0-4),
 autoconf (= 2.71-2),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-10),
 autotools-dev (= 20220109.1),
 base-files (= 12.3),
 base-passwd (= 3.6.1),
 bash (= 5.2.15-1),
 binutils (= 2.39.50.20221224-1),
 binutils-common (= 2.39.50.20221224-1),
 binutils-x86-64-linux-gnu (= 2.39.50.20221224-1),
 bowtie2 (= 2.5.0-2),
 bsdextrautils (= 2.38.1-4),
 bsdutils (= 1:2.38.1-4),
 build-essential (= 12.9),
 bzip2 (= 1.0.8-5+b1),
 ca-certificates (= 20211016),
 ca-certificates-java (= 20220719),
 coreutils (= 9.1-1),
 cpp (= 4:12.2.0-1),
 cpp-12 (= 12.2.0-11),
 dash (= 0.5.11+git20210903+057cd650a4ed-9),
 debconf (= 1.5.80),
 debhelper (= 13.11.3),
 debianutils (= 5.7-0.4),
 default-jre (= 2:1.17-73),
 default-jre-headless (= 2:1.17-73),
 dh-autoreconf (= 20),
 dh-python (= 5.20221230),
 dh-strip-nondeterminism (= 1.13.0-2),
 diffutils (= 1:3.8-3),
 dpkg (= 1.21.13),
 dpkg-dev (= 1.21.13),
 dwz (= 0.15-1),
 examl (= 3.0.22-3),
 file (= 1:5.41-4),
 findutils (= 4.9.0-3),
 fontconfig (= 2.13.1-4.5),
 fontconfig-config (= 2.13.1-4.5),
 fonts-dejavu-core (= 2.37-2),
 g++ (= 4:12.2.0-1),
 g++-12 (= 12.2.0-11),
 gcc (= 4:12.2.0-1),
 gcc-12 (= 12.2.0-11),
 gcc-12-base (= 12.2.0-11),
 gettext (= 0.21-10),
 gettext-base (= 0.21-10),
 grep (= 3.8-3),
 groff-base (= 1.22.4-9),
 gtk-update-icon-cache (= 3.24.35-3),
 gzip (= 1.12-1),
 hicolor-icon-theme (= 0.17-2),
 hostname (= 3.23+nmu1),
 ibverbs-providers (= 43.0-1),
 init-system-helpers (= 1.65.2),
 intltool-debian (= 0.35.0+20060710.6),
 java-common (= 0.73),
 libacl1 (= 2.3.1-2),
 libapache-pom-java (= 25-2),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 12.2.0-11),
 libasound2 (= 1.2.8-1),
 libasound2-data (= 1.2.8-1),
 libatk1.0-0 (= 2.46.0-4),
 libatomic1 (= 12.2.0-11),
 libattr1 (= 1:2.5.1-3),
 libaudit-common (= 1:3.0.7-1.1),
 libaudit1 (= 1:3.0.7-1.1+b2),
 libavahi-client3 (= 0.8-6+b1),
 libavahi-common-data (= 0.8-6+b1),
 libavahi-common3 (= 0.8-6+b1),
 libbarclay-java (= 4.1.0+dfsg-1),
 libbinutils (= 2.39.50.20221224-1),
 libblkid1 (= 2.38.1-4),
 libbrotli1 (= 1.0.9-2+b5),
 libbsd0 (= 0.11.7-1),
 libbz2-1.0 (= 1.0.8-5+b1),
 libc-bin (= 2.36-7),
 libc-dev-bin (= 2.36-7),
 libc6 (= 2.36-7),
 libc6-dev (= 2.36-7),
 libcairo2 (= 1.16.0-7),
 libcap-ng0 (= 0.8.3-1+b2),
 libcap2 (= 1:2.66-3),
 libcbor0.8 (= 0.8.0-2+b1),
 libcc1-0 (= 12.2.0-11),
 libcom-err2 (= 1.46.6~rc1-1+b1),
 libcommons-codec-java (= 1.15-1),
 libcommons-compress-java (= 1.22-1),
 libcommons-io-java (= 2.11.0-2),
 libcommons-jexl2-java (= 2.1.1-6),
 libcommons-lang3-java (= 3.12.0-2),
 libcommons-logging-java (= 1.2-3),
 libcommons-math3-java (= 3.6.1-3),
 libcommons-parent-java (= 43-1),
 libcrypt-dev (= 1:4.4.33-1),
 libcrypt1 (= 1:4.4.33-1),
 libctf-nobfd0 (= 2.39.50.20221224-1),
 libctf0 (= 2.39.50.20221224-1),
 libcups2 (= 2.4.2-1+b2),
 libcurl3-gnutls (= 7.87.0-1),
 libdatrie1 (= 0.2.13-2+b1),
 libdb5.3 (= 5.3.28+dfsg1-0.10),
 libdbus-1-3 (= 1.14.4-1),
 libdebconfclient0 (= 0.266),
 libdebhelper-perl (= 13.11.3),
 libdeflate0 (= 1.14-1),
 libdpkg-perl (= 1.21.13),
 libdrm-amdgpu1 (= 2.4.114-1),
 libdrm-common (= 2.4.114-1),
 libdrm-intel1 (= 2.4.114-1),
 libdrm-nouveau2 (= 2.4.114-1),
 libdrm-radeon1 (= 2.4.114-1),
 libdrm2 (= 2.4.114-1),
 libedit2 (= 3.1-20221030-2),
 libelf1 (= 0.188-2),
 libevent-core-2.1-7 (= 2.1.12-stable-5+b1),
 libevent-pthreads-2.1-7 (= 2.1.12-stable-5+b1),
 libexpat1 (= 2.5.0-1),
 libfabric1 (= 1.11.0-3),
 libffi8 (= 3.4.4-1),
 libfido2-1 (= 1.12.0-2),
 libfile-find-rule-perl (= 0.34-3),
 libfile-stripnondeterminism-perl (= 1.13.0-2),
 libfontconfig1 (= 2.13.1-4.5),
 libfreemarker-java (= 2.3.31-1),
 libfreetype6 (= 2.12.1+dfsg-3),
 libfribidi0 (= 1.0.8-2.1),
 libgatk-native-bindings-java (= 1.0.0+dfsg-2),
 libgcc-12-dev (= 12.2.0-11),
 libgcc-s1 (= 12.2.0-11),
 libgcrypt20 (= 1.10.1-3),
 libgdbm-compat4 (= 1.23-3),
 libgdbm6 (= 1.23-3),
 libgdk-pixbuf-2.0-0 (= 2.42.10+dfsg-1),
 libgdk-pixbuf2.0-common (= 2.42.10+dfsg-1),
 libgif7 (= 5.2.1-2.5),
 libgkl-java (= 0.8.10+dfsg-3),
 libgl1 (= 1.5.0-1),
 libgl1-mesa-dri (= 22.3.1-1),
 libglapi-mesa (= 22.3.1-1),
 libglib2.0-0 (= 2.74.4-1),
 libglvnd0 (= 1.5.0-1),
 libglx-mesa0 (= 22.3.1-1),
 libglx0 (= 1.5.0-1),
 libgmp10 (= 2:6.2.1+dfsg1-1.1),
 libgnutls30 (= 3.7.8-4),
 libgomp1 (= 12.2.0-11),
 libgoogle-gson-java (= 2.10-1),
 libgpg-error0 (= 1.46-1),
 libgprofng0 (= 2.39.50.20221224-1),
 libgraphite2-3 (= 1.3.14-1),
 libgssapi-krb5-2 (= 1.20.1-1),
 libgtk2.0-0 (= 2.24.33-2),
 libgtk2.0-common (= 2.24.33-2),
 libharfbuzz0b (= 6.0.0-1),
 libhogweed6 (= 3.8.1-2),
 libhts3 (= 1.16+ds-3),
 libhtscodecs2 (= 1.3.0-4),
 libhtsjdk-java (= 3.0.4+dfsg-1),
 libhttpclient-java (= 4.5.14-1),
 libhttpcore-java (= 4.4.16-1),
 libhwloc-plugins (= 2.9.0-1),
 libhwloc15 (= 2.9.0-1),
 libibverbs1 (= 43.0-1),
 libicu72 (= 72.1-3),
 libidn2-0 (= 2.3.3-1+b1),
 libisl23 (= 0.25-1),
 libitm1 (= 12.2.0-11),
 libjansson4 (= 2.14-2),
 libjbig0 (= 2.1-6.1),
 libjoptsimple-java (= 5.0.4-4),
 libjpeg62-turbo (= 1:2.1.2-1+b1),
 libk5crypto3 (= 1.20.1-1),
 libkeyutils1 (= 1.6.3-2),
 libkrb5-3 (= 1.20.1-1),
 libkrb5support0 (= 1.20.1-1),
 liblcms2-2 (= 2.13.1-1+b1),
 libldap-2.5-0 (= 2.5.13+dfsg-2+b1),
 liblerc4 (= 4.0.0+ds-2),
 liblightcouch-java (= 0.2.0-1),
 libllvm15 (= 1:15.0.6-3),
 liblog4j2-java (= 2.19.0-2),
 liblsan0 (= 12.2.0-11),
 liblz4-1 (= 1.9.4-1),
 liblzma5 (= 5.4.0-0.1),
 libmagic-mgc (= 1:5.41-4),
 libmagic1 (= 1:5.41-4),
 libmd0 (= 1.0.4-2),
 libmjson-java (= 1.4.0-3),
 libmongodb-java (= 3.6.3-2),
 libmount1 (= 2.38.1-4),
 libmpc3 (= 1.3.1-1),
 libmpdec3 (= 2.5.1-2),
 libmpfr6 (= 4.1.1-3),
 libmunge2 (= 0.5.14-6+b1),
 libncursesw6 (= 6.3+20221224-2),
 libnettle8 (= 3.8.1-2),
 libnghttp2-14 (= 1.51.0-1),
 libngs-java (= 2.11.2-4),
 libngs-sdk-dev (= 2.11.2-4),
 libngs-sdk2 (= 2.11.2-4),
 libnl-3-200 (= 3.7.0-0.2+b1),
 libnl-route-3-200 (= 3.7.0-0.2+b1),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libnspr4 (= 2:4.35-1),
 libnss3 (= 2:3.85-1),
 libnuma1 (= 2.0.16-1),
 libnumber-compare-perl (= 0.03-3),
 libopenmpi3 (= 4.1.4-3),
 libp11-kit0 (= 0.24.1-2),
 libpam-modules (= 1.5.2-5),
 libpam-modules-bin (= 1.5.2-5),
 libpam-runtime (= 1.5.2-5),
 libpam0g (= 1.5.2-5),
 libpango-1.0-0 (= 1.50.12+ds-1),
 libpangocairo-1.0-0 (= 1.50.12+ds-1),
 libpangoft2-1.0-0 (= 1.50.12+ds-1),
 libpciaccess0 (= 0.17-2),
 libpcre2-8-0 (= 10.40-3),
 libpcsclite1 (= 1.9.9-1),
 libperl5.36 (= 5.36.0-6),
 libpicard-java (= 2.27.5+dfsg-2),
 libpipeline1 (= 1.5.7-1),
 libpixman-1-0 (= 0.42.2-1),
 libpmix2 (= 4.2.2-1),
 libpng16-16 (= 1.6.39-2),
 libpopt0 (= 1.19+dfsg-1),
 libpsl5 (= 0.21.0-1.2),
 libpsm-infinipath1 (= 3.3+20.604758e7-6.2),
 libpsm2-2 (= 11.2.185-2),
 libpython3-stdlib (= 3.10.6-3+b1),
 libpython3.10-minimal (= 3.10.9-1),
 libpython3.10-stdlib (= 3.10.9-1),
 libquadmath0 (= 12.2.0-11),
 librdmacm1 (= 43.0-1),
 libreadline8 (= 8.2-1.2),
 librhino-java (= 1.7.7.2-3),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
 libsasl2-2 (= 2.1.28+dfsg-10),
 libsasl2-modules-db (= 2.1.28+dfsg-10),
 libseccomp2 (= 2.5.4-1+b2),
 libselinux1 (= 3.4-1+b4),
 libsemanage-common (= 3.4-1),
 libsemanage2 (= 3.4-1+b4),
 libsensors-config (= 1:3.6.0-7.1),
 libsensors5 (= 1:3.6.0-7.1),
 libsepol2 (= 3.4-2),
 libslf4j-java (= 1.7.32-1),
 libsmartcols1 (= 2.38.1-4),
 libsnappy-java (= 1.1.8.3-1),
 libsnappy-jni (= 1.1.8.3-1),
 libsnappy1v5 (= 1.1.9-2),
 libsqlite3-0 (= 3.40.1-1),
 libssh2-1 (= 1.10.0-3+b1),
 libssl3 (= 3.0.7-1),
 libstdc++-12-dev (= 12.2.0-11),
 libstdc++6 (= 12.2.0-11),
 libsub-override-perl (= 0.09-4),
 libsystemd0 (= 252.4-1),
 libtasn1-6 (= 4.19.0-2),
 libtext-glob-perl (= 0.11-3),
 libthai-data (= 0.1.29-1),
 libthai0 (= 0.1.29-1),
 libtiff5 (= 4.4.0-6),
 libtinfo6 (= 6.3+20221224-2),
 libtirpc-common (= 1.3.3+ds-1),
 libtirpc-dev (= 1.3.3+ds-1),
 libtirpc3 (= 1.3.3+ds-1),
 libtool (= 2.4.7-5),
 libtsan2 (= 12.2.0-11),
 libubsan1 (= 12.2.0-11),
 libuchardet0 (= 0.0.7-1),
 libucx0 (= 1.13.1-1),
 libudev1 (= 252.4-1),
 libunistring2 (= 1.0-2),
 libuuid1 (= 2.38.1-4),
 libwebp7 (= 1.2.2-2+b2),
 libx11-6 (= 2:1.8.3-3),
 libx11-data (= 2:1.8.3-3),
 libx11-xcb1 (= 2:1.8.3-3),
 libxau6 (= 1:1.0.9-1),
 libxcb-dri2-0 (= 1.15-1),
 libxcb-dri3-0 (= 1.15-1),
 libxcb-glx0 (= 1.15-1),
 libxcb-present0 (= 1.15-1),
 libxcb-render0 (= 1.15-1),
 libxcb-shm0 (= 1.15-1),
 libxcb-sync1 (= 1.15-1),
 libxcb-xfixes0 (= 1.15-1),
 libxcb1 (= 1.15-1),
 libxcomposite1 (= 1:0.4.5-1),
 libxcursor1 (= 1:1.2.1-1),
 libxdamage1 (= 1:1.1.6-1),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.4-1+b1),
 libxfixes3 (= 1:6.0.0-2),
 libxi6 (= 2:1.8-1+b1),
 libxinerama1 (= 2:1.1.4-3),
 libxml2 (= 2.9.14+dfsg-1.1+b2),
 libxnvctrl0 (= 510.85.02-2),
 libxrandr2 (= 2:1.5.2-2+b1),
 libxrender1 (= 1:0.9.10-1.1),
 libxshmfence1 (= 1.3-1),
 libxtst6 (= 2:1.2.3-1.1),
 libxxf86vm1 (= 1:1.1.4-1+b2),
 libxxhash0 (= 0.8.1-1),
 libz3-4 (= 4.8.12-3),
 libzstd1 (= 1.5.2+dfsg2-3),
 linux-libc-dev (= 6.0.12-1),
 login (= 1:4.13+dfsg1-1),
 m4 (= 1.4.19-1),
 make (= 4.3-4.1),
 man-db (= 2.11.1-1),
 mawk (= 1.3.4.20200120-3.1),
 media-types (= 8.0.0),
 ncurses-base (= 6.3+20221224-2),
 ncurses-bin (= 6.3+20221224-2),
 ocl-icd-libopencl1 (= 2.3.1-1),
 openjdk-17-jre (= 17.0.5+8-2),
 openjdk-17-jre-headless (= 17.0.5+8-2),
 openmpi-bin (= 4.1.4-3),
 openmpi-common (= 4.1.4-3),
 openssh-client (= 1:9.1p1-1),
 openssl (= 3.0.7-1),
 passwd (= 1:4.13+dfsg1-1),
 patch (= 2.7.6-7),
 perl (= 5.36.0-6),
 perl-base (= 5.36.0-6),
 perl-modules-5.36 (= 5.36.0-6),
 picard-tools (= 2.27.5+dfsg-2),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.10.6-3+b1),
 python3-attr (= 22.2.0-1),
 python3-coloredlogs (= 15.0.1-1),
 python3-configargparse (= 1.5.3-1),
 python3-distutils (= 3.10.8-1),
 python3-exceptiongroup (= 1.0.4-4),
 python3-humanfriendly (= 10.0-3),
 python3-iniconfig (= 1.1.1-2),
 python3-lib2to3 (= 3.10.8-1),
 python3-minimal (= 3.10.6-3+b1),
 python3-more-itertools (= 8.10.0-2),
 python3-packaging (= 22.0-2),
 python3-pkg-resources (= 65.6.3-1),
 python3-pluggy (= 1.0.0+repack-1),
 python3-py (= 1.11.0-1),
 python3-pysam (= 0.20.0+ds-2),
 python3-pytest (= 7.2.0-3),
 python3-ruamel.yaml (= 0.17.21-1),
 python3-ruamel.yaml.clib (= 0.2.7-1+b1),
 python3-setproctitle (= 1.3.1-1+b1),
 python3-setuptools (= 65.6.3-1),
 python3-tomli (= 2.0.1-2),
 python3.10 (= 3.10.9-1),
 python3.10-minimal (= 3.10.9-1),
 readline-common (= 8.2-1.2),
 rpcsvc-proto (= 1.4.3-1),
 rsync (= 3.2.7-1),
 sed (= 4.8-1.1),
 sensible-utils (= 0.0.17),
 shared-mime-info (= 2.2-1),
 sysvinit-utils (= 3.06-2),
 tar (= 1.34+dfsg-1.1),
 ucf (= 3.0043),
 usr-is-merged (= 35),
 usrmerge (= 35),
 util-linux (= 2.38.1-4),
 util-linux-extra (= 2.38.1-4),
 x11-common (= 1:7.7+23),
 xz-utils (= 5.4.0-0.1),
 zlib1g (= 1:1.2.13.dfsg-1)
Environment:
 DEB_BUILD_OPTIONS="buildinfo=+all reproducible=+all parallel=15"
 LANG="C"
 LC_ALL="C"
 SOURCE_DATE_EPOCH="1662843253"
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