Format: 1.0
Source: python-biopython
Binary: python3-biopython python-biopython-doc python3-biopython-sql
Architecture: amd64
Version: 1.76+dfsg-1
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Sat, 21 Dec 2019 00:30:20 +0000
Build-Path: /build/python-biopython-MsVhQS/python-biopython-1.76+dfsg
Build-Tainted-By:
 usr-local-has-programs
Installed-Build-Depends:
 adduser (= 3.118),
 autoconf (= 2.69-11),
 automake (= 1:1.16.1-4),
 autopoint (= 0.19.8.1-10),
 autotools-dev (= 20180224.1),
 base-files (= 11),
 base-passwd (= 3.5.47),
 bash (= 5.0-5),
 binutils (= 2.33.1-6),
 binutils-common (= 2.33.1-6),
 binutils-x86-64-linux-gnu (= 2.33.1-6),
 bsdmainutils (= 11.1.2+b1),
 bsdutils (= 1:2.34-0.1),
 build-essential (= 12.8),
 bwa (= 0.7.17-4),
 bzip2 (= 1.0.8-2),
 clustalo (= 1.2.4-2),
 clustalw (= 2.1+lgpl-6),
 coreutils (= 8.30-3+b1),
 cpp (= 4:9.2.1-3.1),
 cpp-9 (= 9.2.1-21),
 dash (= 0.5.10.2-6),
 debconf (= 1.5.73),
 debhelper (= 12.7.2),
 debianutils (= 4.9.1),
 dh-autoreconf (= 19),
 dh-python (= 4.20191017),
 dh-strip-nondeterminism (= 1.6.3-1),
 dialign (= 2.2.1-10),
 diffutils (= 1:3.7-3),
 dpkg (= 1.19.7),
 dpkg-dev (= 1.19.7),
 dssp (= 3.0.0-3+b1),
 dwz (= 0.13-5),
 emboss (= 6.6.0+dfsg-7+b1),
 emboss-data (= 6.6.0+dfsg-7),
 emboss-lib (= 6.6.0+dfsg-7+b1),
 fasttree (= 2.1.11-1),
 fdisk (= 2.34-0.1),
 file (= 1:5.37-6),
 findutils (= 4.7.0-1),
 flex (= 2.6.4-6.2),
 fontconfig-config (= 2.13.1-2),
 fonts-dejavu-core (= 2.37-1),
 fonts-lmodern (= 2.004.5-6),
 fonts-lyx (= 2.3.3-2),
 fonts-urw-base35 (= 20170801.1-3),
 g++ (= 4:9.2.1-3.1),
 g++-9 (= 9.2.1-21),
 gcc (= 4:9.2.1-3.1),
 gcc-9 (= 9.2.1-21),
 gcc-9-base (= 9.2.1-21),
 gettext (= 0.19.8.1-10),
 gettext-base (= 0.19.8.1-10),
 ghostscript (= 9.50~dfsg-5),
 grep (= 3.3-1),
 groff-base (= 1.22.4-3),
 gsfonts (= 1:8.11+urwcyr1.0.7~pre44-4.4),
 gzip (= 1.9-3+b1),
 hevea (= 2.32-3),
 hostname (= 3.23),
 init-system-helpers (= 1.57),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.2.53-5),
 libarchive-zip-perl (= 1.67-1),
 libargtable2-0 (= 13-1+b1),
 libasan5 (= 9.2.1-21),
 libatomic1 (= 9.2.1-21),
 libattr1 (= 1:2.4.48-5),
 libaudit-common (= 1:2.8.5-2),
 libaudit1 (= 1:2.8.5-2+b1),
 libavahi-client3 (= 0.7-5),
 libavahi-common-data (= 0.7-5),
 libavahi-common3 (= 0.7-5),
 libbinutils (= 2.33.1-6),
 libblas3 (= 3.9.0-1),
 libblkid1 (= 2.34-0.1),
 libboost-iostreams1.67.0 (= 1.67.0-16),
 libboost-program-options1.67.0 (= 1.67.0-16),
 libboost-system1.67.0 (= 1.67.0-16),
 libboost-thread1.67.0 (= 1.67.0-16),
 libbrotli1 (= 1.0.7-5+b1),
 libbsd0 (= 0.10.0-1),
 libbz2-1.0 (= 1.0.8-2),
 libc-bin (= 2.29-6),
 libc-dev-bin (= 2.29-6),
 libc6 (= 2.29-6),
 libc6-dev (= 2.29-6),
 libcairo2 (= 1.16.0-4),
 libcap-ng0 (= 0.7.9-2.1+b1),
 libcc1-0 (= 9.2.1-21),
 libcom-err2 (= 1.45.4-1),
 libcroco3 (= 0.6.13-1),
 libcrypt1 (= 1:4.4.10-7),
 libcrypt1-dev (= 1:4.4.10-7),
 libcups2 (= 2.3.0-7),
 libcurl3-gnutls (= 7.67.0-2),
 libdb5.3 (= 5.3.28+dfsg1-0.6),
 libdbus-1-3 (= 1.12.16-2),
 libdebconfclient0 (= 0.250),
 libdebhelper-perl (= 12.7.2),
 libdeflate0 (= 1.3-3),
 libdpkg-perl (= 1.19.7),
 libedit2 (= 3.1-20191025-1),
 libelf1 (= 0.176-1.1),
 libevent-2.1-7 (= 2.1.11-stable-1),
 libevent-core-2.1-7 (= 2.1.11-stable-1),
 libevent-pthreads-2.1-7 (= 2.1.11-stable-1),
 libexpat1 (= 2.2.9-1),
 libexpat1-dev (= 2.2.9-1),
 libfabric1 (= 1.6.2-3+b1),
 libfdisk1 (= 2.34-0.1),
 libffi6 (= 3.2.1-9),
 libfile-stripnondeterminism-perl (= 1.6.3-1),
 libfontconfig1 (= 2.13.1-2+b1),
 libfreetype6 (= 2.10.1-2),
 libgcc-9-dev (= 9.2.1-21),
 libgcc1 (= 1:9.2.1-21),
 libgcrypt20 (= 1.8.5-3),
 libgd3 (= 2.2.5-5.2),
 libgdbm-compat4 (= 1.18.1-5),
 libgdbm6 (= 1.18.1-5),
 libgfortran5 (= 9.2.1-21),
 libglib2.0-0 (= 2.62.3-2),
 libgmp10 (= 2:6.1.2+dfsg-4),
 libgnutls30 (= 3.6.11.1-2),
 libgomp1 (= 9.2.1-21),
 libgpg-error0 (= 1.36-7),
 libgraphite2-3 (= 1.3.13-11),
 libgs9 (= 9.50~dfsg-5),
 libgs9-common (= 9.50~dfsg-5),
 libgssapi-krb5-2 (= 1.17-6),
 libharfbuzz-icu0 (= 2.6.4-1),
 libharfbuzz0b (= 2.6.4-1),
 libhogweed5 (= 3.5.1+really3.5.1-2),
 libhpdf-2.3.0 (= 2.3.0+dfsg-1+b1),
 libhts3 (= 1.10.2-1),
 libhwloc-plugins (= 2.1.0+dfsg-2),
 libhwloc15 (= 2.1.0+dfsg-2),
 libibverbs1 (= 26.0-2),
 libice6 (= 2:1.0.9-2),
 libicu63 (= 63.2-2),
 libidn11 (= 1.33-2.2),
 libidn2-0 (= 2.2.0-2),
 libijs-0.35 (= 0.35-15),
 libimagequant0 (= 2.12.2-1.1),
 libisl22 (= 0.22-2),
 libitm1 (= 9.2.1-21),
 libjbig0 (= 2.1-3.1+b2),
 libjbig2dec0 (= 0.17-1),
 libjpeg62-turbo (= 1:1.5.2-2+b1),
 libjs-jquery (= 3.3.1~dfsg-3),
 libjs-jquery-ui (= 1.12.1+dfsg-5),
 libk5crypto3 (= 1.17-6),
 libkeyutils1 (= 1.6-6),
 libkpathsea6 (= 2019.20190605.51237-3),
 libkrb5-3 (= 1.17-6),
 libkrb5support0 (= 1.17-6),
 liblapack3 (= 3.9.0-1),
 liblbfgsb0 (= 3.0+dfsg.3-7),
 liblcms2-2 (= 2.9-4),
 libldap-2.4-2 (= 2.4.48+dfsg-1+b2),
 libldap-common (= 2.4.48+dfsg-1),
 liblmdb0 (= 0.9.22-1),
 liblsan0 (= 9.2.1-21),
 libltdl7 (= 2.4.6-11),
 liblz4-1 (= 1.9.2-2),
 liblzma5 (= 5.2.4-1+b1),
 libmagic-mgc (= 1:5.37-6),
 libmagic1 (= 1:5.37-6),
 libmariadb3 (= 1:10.3.21-1),
 libmbedcrypto3 (= 2.16.3-1),
 libmbedtls12 (= 2.16.3-1),
 libmbedx509-0 (= 2.16.3-1),
 libmount1 (= 2.34-0.1),
 libmpc3 (= 1.1.0-1),
 libmpdec2 (= 2.4.2-2),
 libmpfr6 (= 4.0.2-1),
 libncurses6 (= 6.1+20191019-1),
 libncursesw6 (= 6.1+20191019-1),
 libnetpbm10 (= 2:10.0-15.3+b2),
 libnettle7 (= 3.5.1+really3.5.1-2),
 libnghttp2-14 (= 1.40.0-1),
 libnl-3-200 (= 3.4.0-1+b1),
 libnl-route-3-200 (= 3.4.0-1+b1),
 libnuma1 (= 2.0.12-1+b1),
 libopenjp2-7 (= 2.3.1-1),
 libopenmpi3 (= 4.0.2-5),
 libp11-kit0 (= 0.23.18.1-2),
 libpam-modules (= 1.3.1-5),
 libpam-modules-bin (= 1.3.1-5),
 libpam-runtime (= 1.3.1-5),
 libpam0g (= 1.3.1-5),
 libpaper-utils (= 1.1.28+b1),
 libpaper1 (= 1.1.28+b1),
 libpciaccess0 (= 0.14-1),
 libpcre2-8-0 (= 10.34-7),
 libpcre3 (= 2:8.39-12+b1),
 libperl5.30 (= 5.30.0-9),
 libpipeline1 (= 1.5.1-3),
 libpixman-1-0 (= 0.36.0-1),
 libpmix2 (= 3.1.4-1+b1),
 libpng16-16 (= 1.6.37-1),
 libpq5 (= 12.1-1),
 libpsl5 (= 0.20.2-2),
 libpsm-infinipath1 (= 3.3+20.604758e7-6+b1),
 libpsm2-2 (= 11.2.86-1),
 libptexenc1 (= 2019.20190605.51237-3),
 libpython-stdlib (= 2.7.17-2),
 libpython2-stdlib (= 2.7.17-2),
 libpython2.7-minimal (= 2.7.17-1),
 libpython2.7-stdlib (= 2.7.17-1),
 libpython3-all-dev (= 3.7.5-3),
 libpython3-dev (= 3.7.5-3),
 libpython3-stdlib (= 3.7.5-3),
 libpython3.7 (= 3.7.6-1),
 libpython3.7-dev (= 3.7.6-1),
 libpython3.7-minimal (= 3.7.6-1),
 libpython3.7-stdlib (= 3.7.6-1),
 libpython3.8 (= 3.8.1-1),
 libpython3.8-dev (= 3.8.1-1),
 libpython3.8-minimal (= 3.8.1-1),
 libpython3.8-stdlib (= 3.8.1-1),
 libquadmath0 (= 9.2.1-21),
 librdmacm1 (= 26.0-2),
 libreadline8 (= 8.0-3),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1),
 libsasl2-2 (= 2.1.27+dfsg-1),
 libsasl2-modules-db (= 2.1.27+dfsg-1),
 libseccomp2 (= 2.4.2-2),
 libselinux1 (= 3.0-1),
 libsemanage-common (= 3.0-1),
 libsemanage1 (= 3.0-1),
 libsepol1 (= 3.0-1),
 libsigsegv2 (= 2.12-2),
 libsm6 (= 2:1.2.3-1),
 libsmartcols1 (= 2.34-0.1),
 libsqlite3-0 (= 3.30.1-1),
 libssh2-1 (= 1.8.0-2.1),
 libssl1.1 (= 1.1.1d-2),
 libstdc++-9-dev (= 9.2.1-21),
 libstdc++6 (= 9.2.1-21),
 libsub-override-perl (= 0.09-2),
 libsynctex2 (= 2019.20190605.51237-3),
 libsystemd0 (= 244-3),
 libtasn1-6 (= 4.15.0-2),
 libteckit0 (= 2.5.8+ds2-5),
 libtexlua53 (= 2019.20190605.51237-3),
 libtexluajit2 (= 2019.20190605.51237-3),
 libtiff5 (= 4.1.0+git191117-1),
 libtinfo6 (= 6.1+20191019-1),
 libtool (= 2.4.6-11),
 libtsan0 (= 9.2.1-21),
 libubsan1 (= 9.2.1-21),
 libuchardet0 (= 0.0.6-3),
 libudev1 (= 244-3),
 libunistring2 (= 0.9.10-2),
 libuuid1 (= 2.34-0.1),
 libwebp6 (= 0.6.1-2+b1),
 libwebpdemux2 (= 0.6.1-2+b1),
 libwebpmux3 (= 0.6.1-2+b1),
 libx11-6 (= 2:1.6.8-1),
 libx11-data (= 2:1.6.8-1),
 libxau6 (= 1:1.0.8-1+b2),
 libxaw7 (= 2:1.0.13-1+b2),
 libxcb-render0 (= 1.13.1-2),
 libxcb-shm0 (= 1.13.1-2),
 libxcb1 (= 1.13.1-2),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.3-1+b2),
 libxi6 (= 2:1.7.9-1),
 libxml2 (= 2.9.4+dfsg1-8),
 libxmu6 (= 2:1.1.2-2+b3),
 libxpm4 (= 1:3.5.12-1),
 libxrender1 (= 1:0.9.10-1),
 libxt6 (= 1:1.1.5-1+b3),
 libzstd1 (= 1.4.4+dfsg-1),
 libzzip-0-13 (= 0.13.62-3.2),
 linux-libc-dev (= 5.3.15-1),
 login (= 1:4.7-2),
 lsb-base (= 11.1.0),
 m4 (= 1.4.18-4),
 mafft (= 7.453-1),
 make (= 4.2.1-1.2),
 man-db (= 2.9.0-2),
 mariadb-common (= 1:10.3.21-1),
 mawk (= 1.3.3-17+b3),
 mime-support (= 3.64),
 muscle (= 1:3.8.1551-2),
 mysql-common (= 5.8+1.0.5),
 ncbi-blast+ (= 2.9.0-3),
 ncbi-data (= 6.1.20170106+dfsg1-7),
 ncurses-base (= 6.1+20191019-1),
 ncurses-bin (= 6.1+20191019-1),
 netpbm (= 2:10.0-15.3+b2),
 ocaml-base-nox (= 4.08.1-5),
 ocl-icd-libopencl1 (= 2.2.12-2),
 openmpi-bin (= 4.0.2-5),
 openmpi-common (= 4.0.2-5),
 openssh-client (= 1:8.1p1-2),
 passwd (= 1:4.7-2),
 patch (= 2.7.6-6),
 perl (= 5.30.0-9),
 perl-base (= 5.30.0-9),
 perl-modules-5.30 (= 5.30.0-9),
 phylip (= 1:3.697+dfsg-1),
 phyml (= 3:3.3.20190909-1),
 po-debconf (= 1.0.21),
 poppler-data (= 0.4.9-2),
 prank (= 0.0.170427+dfsg-2),
 preview-latex-style (= 11.91-2),
 probcons (= 1.12-12),
 python (= 2.7.17-2),
 python-matplotlib-data (= 3.0.2-2),
 python-minimal (= 2.7.17-2),
 python2 (= 2.7.17-2),
 python2-minimal (= 2.7.17-2),
 python2.7 (= 2.7.17-1),
 python2.7-minimal (= 2.7.17-1),
 python3 (= 3.7.5-3),
 python3-all (= 3.7.5-3),
 python3-all-dev (= 3.7.5-3),
 python3-cycler (= 0.10.0-1),
 python3-dateutil (= 2.7.3-3),
 python3-decorator (= 4.3.0-1.1),
 python3-dev (= 3.7.5-3),
 python3-distutils (= 3.8.0-1),
 python3-isodate (= 0.6.0-1),
 python3-kiwisolver (= 1.0.1-2+b2),
 python3-lib2to3 (= 3.8.0-1),
 python3-linecache2 (= 1.0.0-3),
 python3-matplotlib (= 3.0.2-2+b2),
 python3-minimal (= 3.7.5-3),
 python3-mysqldb (= 1.4.4-1+b1),
 python3-networkx (= 2.4-2),
 python3-numpy (= 1:1.17.4-4),
 python3-pil (= 6.2.1-2+b1),
 python3-pkg-resources (= 41.4.0-1),
 python3-psycopg2 (= 2.8.4-1),
 python3-pygments (= 2.3.1+dfsg-1),
 python3-pyparsing (= 2.4.2-1),
 python3-rdflib (= 4.2.2-2),
 python3-renderpm (= 3.5.31-1+b1),
 python3-reportlab (= 3.5.31-1),
 python3-reportlab-accel (= 3.5.31-1+b1),
 python3-scipy (= 1.3.3-3),
 python3-setuptools (= 41.4.0-1),
 python3-six (= 1.13.0-1),
 python3-traceback2 (= 1.4.0-5),
 python3-unittest2 (= 1.1.0-6.1),
 python3.7 (= 3.7.6-1),
 python3.7-dev (= 3.7.6-1),
 python3.7-minimal (= 3.7.6-1),
 python3.8 (= 3.8.1-1),
 python3.8-dev (= 3.8.1-1),
 python3.8-minimal (= 3.8.1-1),
 raxml (= 8.2.12+dfsg-2),
 readline-common (= 8.0-3),
 samtools (= 1.10-1),
 sed (= 4.7-1),
 sensible-utils (= 0.0.12+nmu1),
 sysvinit-utils (= 2.96-1),
 t-coffee (= 12.00.7fb08c2-4),
 t1utils (= 1.41-3),
 tar (= 1.30+dfsg-6+b1),
 tex-common (= 6.13),
 texlive-base (= 2019.20191208-4),
 texlive-binaries (= 2019.20190605.51237-3),
 texlive-fonts-recommended (= 2019.20191208-4),
 texlive-latex-base (= 2019.20191208-4),
 texlive-latex-extra (= 2019.20191208-1),
 texlive-latex-recommended (= 2019.20191208-4),
 texlive-pictures (= 2019.20191208-4),
 ttf-bitstream-vera (= 1.10-8),
 tzdata (= 2019c-3),
 ucf (= 3.0038+nmu1),
 util-linux (= 2.34-0.1),
 wise (= 2.4.1-21),
 wise-data (= 2.4.1-21),
 x11-common (= 1:7.7+20),
 xdg-utils (= 1.1.3-1),
 xz-utils (= 5.2.4-1+b1),
 zlib1g (= 1:1.2.11.dfsg-1+b1),
 zlib1g-dev (= 1:1.2.11.dfsg-1+b1)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1576868446"