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Format: 1.0
Source: trinityrnaseq
Binary: trinityrnaseq trinityrnaseq-dbgsym trinityrnaseq-examples
Architecture: all amd64
Version: 2.13.2+dfsg-3
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Build-Origin: Debian
Build-Architecture: amd64
Build-Kernel-Version: 5.18.0-0.bpo.1-amd64 #1 SMP PREEMPT_DYNAMIC Debian 5.18.2-1~bpo11+1 (2022-06-14)
Build-Date: Mon, 11 Sep 2023 13:27:31 +1400
Build-Path: /build/2/trinityrnaseq-2.13.2+dfsg/2nd
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 adduser (= 3.123),
 autoconf (= 2.71-2),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-6),
 autotools-dev (= 20220109.1),
 base-files (= 12.2),
 base-passwd (= 3.5.52),
 bash (= 5.1-6.1),
 binutils (= 2.38.90.20220713-2),
 binutils-common (= 2.38.90.20220713-2),
 binutils-x86-64-linux-gnu (= 2.38.90.20220713-2),
 bowtie2 (= 2.4.5-1),
 bsdextrautils (= 2.38.1-1),
 bsdutils (= 1:2.38.1-1),
 build-essential (= 12.9),
 bzip2 (= 1.0.8-5),
 ca-certificates (= 20211016),
 ca-certificates-java (= 20220719),
 cmake (= 3.24.0-1),
 cmake-data (= 3.24.0-1),
 coreutils (= 8.32-4.1),
 cpp (= 4:12.1.0-3),
 cpp-12 (= 12.1.0-7),
 dash (= 0.5.11+git20210903+057cd650a4ed-8),
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 debconf (= 1.5.79),
 debhelper (= 13.8),
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 default-jdk (= 2:1.11-72),
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 default-jre (= 2:1.11-72),
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 devscripts (= 2.22.2),
 dh-autoreconf (= 20),
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 dh-strip-nondeterminism (= 1.13.0-1),
 diffutils (= 1:3.7-5),
 dirmngr (= 2.2.35-3),
 dpkg (= 1.21.9),
 dpkg-dev (= 1.21.9),
 dwz (= 0.14-1),
 emacsen-common (= 3.0.4),
 fakeroot (= 1.29-1),
 file (= 1:5.41-4),
 findutils (= 4.9.0-3),
 fontconfig (= 2.13.1-4.4),
 fontconfig-config (= 2.13.1-4.4),
 fonts-dejavu-core (= 2.37-2),
 g++ (= 4:12.1.0-3),
 g++-12 (= 12.1.0-7),
 gcc (= 4:12.1.0-3),
 gcc-11-base (= 11.3.0-5),
 gcc-12 (= 12.1.0-7),
 gcc-12-base (= 12.1.0-7),
 gettext (= 0.21-6),
 gettext-base (= 0.21-6),
 gmap (= 2021-12-17+ds-1),
 gnupg (= 2.2.35-3),
 gnupg-l10n (= 2.2.35-3),
 gnupg-utils (= 2.2.35-3),
 gpg (= 2.2.35-3),
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 gpg-wks-client (= 2.2.35-3),
 gpg-wks-server (= 2.2.35-3),
 gpgconf (= 2.2.35-3),
 gpgsm (= 2.2.35-3),
 gpgv (= 2.2.35-3),
 grep (= 3.7-1),
 groff-base (= 1.22.4-8),
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 hisat2 (= 2.2.1-3+b1),
 hostname (= 3.23),
 init-system-helpers (= 1.64),
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 jaligner (= 1.0+dfsg-8),
 java-common (= 0.72),
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 kallisto (= 0.48.0+dfsg-2),
 libacl1 (= 2.3.1-1),
 libapache-pom-java (= 18-1),
 libarchive-zip-perl (= 1.68-1),
 libarchive13 (= 3.6.0-1),
 libasan6 (= 11.3.0-5),
 libasan8 (= 12.1.0-7),
 libasound2 (= 1.2.7.2-1),
 libasound2-data (= 1.2.7.2-1),
 libassuan0 (= 2.5.5-4),
 libatinject-jsr330-api-java (= 1.0+ds1-5),
 libatomic1 (= 12.1.0-7),
 libattr1 (= 1:2.5.1-1),
 libaudit-common (= 1:3.0.7-1),
 libaudit1 (= 1:3.0.7-1+b1),
 libavahi-client3 (= 0.8-6),
 libavahi-common-data (= 0.8-6),
 libavahi-common3 (= 0.8-6),
 libb-hooks-op-check-perl (= 0.22-2),
 libbarclay-java (= 4.0.1+dfsg-2),
 libbinutils (= 2.38.90.20220713-2),
 libblas3 (= 3.10.1-2),
 libblkid1 (= 2.38.1-1),
 libboost-dev (= 1.74.0.3),
 libboost-filesystem1.74.0 (= 1.74.0-16.1+b1),
 libboost-iostreams1.74.0 (= 1.74.0-16.1+b1),
 libboost-program-options1.74.0 (= 1.74.0-16.1+b1),
 libboost1.74-dev (= 1.74.0-16.1+b1),
 libbrotli1 (= 1.0.9-2+b4),
 libbsd0 (= 0.11.6-1),
 libbz2-1.0 (= 1.0.8-5),
 libc-bin (= 2.34-1),
 libc-dev-bin (= 2.34-1),
 libc6 (= 2.34-1),
 libc6-dev (= 2.34-1),
 libcairo2 (= 1.16.0-6),
 libcap-ng0 (= 0.8.3-1+b1),
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 libcc1-0 (= 12.1.0-7),
 libclass-method-modifiers-perl (= 2.13-1),
 libclass-xsaccessor-perl (= 1.19-4),
 libcom-err2 (= 1.46.5-2),
 libcommons-codec-java (= 1.15-1),
 libcommons-compress-java (= 1.21-1),
 libcommons-io-java (= 2.11.0-2),
 libcommons-jexl2-java (= 2.1.1-6),
 libcommons-lang3-java (= 3.12.0-2),
 libcommons-logging-java (= 1.2-3),
 libcommons-math3-java (= 3.6.1-3),
 libcommons-parent-java (= 43-1),
 libcrypt-dev (= 1:4.4.28-2),
 libcrypt1 (= 1:4.4.28-2),
 libctf-nobfd0 (= 2.38.90.20220713-2),
 libctf0 (= 2.38.90.20220713-2),
 libcups2 (= 2.4.2-1+b1),
 libcurl3-gnutls (= 7.84.0-2),
 libcurl4 (= 7.84.0-2),
 libcurl4-gnutls-dev (= 7.84.0-2),
 libdatrie1 (= 0.2.13-2),
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 libdbus-1-3 (= 1.14.0-2),
 libdebconfclient0 (= 0.263),
 libdebhelper-perl (= 13.8),
 libdeflate-dev (= 1.12-1),
 libdeflate0 (= 1.12-1),
 libdevel-callchecker-perl (= 0.008-1+b3),
 libdpkg-perl (= 1.21.9),
 libdrm-amdgpu1 (= 2.4.112-3),
 libdrm-common (= 2.4.112-3),
 libdrm-nouveau2 (= 2.4.112-3),
 libdrm-radeon1 (= 2.4.112-3),
 libdrm2 (= 2.4.112-3),
 libdynaloader-functions-perl (= 0.003-2),
 libedit2 (= 3.1-20210910-1),
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 libencode-locale-perl (= 1.05-2),
 libexpat1 (= 2.4.8-1),
 libfakeroot (= 1.29-1),
 libffi8 (= 3.4.2-4),
 libfile-dirlist-perl (= 0.05-2),
 libfile-homedir-perl (= 1.006-1),
 libfile-listing-perl (= 6.15-1),
 libfile-stripnondeterminism-perl (= 1.13.0-1),
 libfile-touch-perl (= 0.12-1),
 libfile-which-perl (= 1.27-1),
 libfontconfig1 (= 2.13.1-4.4),
 libfreemarker-java (= 2.3.31-1),
 libfreetype6 (= 2.12.1+dfsg-3),
 libfribidi0 (= 1.0.8-2.1),
 libgatk-native-bindings-java (= 1.0.0-2.1),
 libgcc-11-dev (= 11.3.0-5),
 libgcc-12-dev (= 12.1.0-7),
 libgcc-s1 (= 12.1.0-7),
 libgcrypt20 (= 1.10.1-2),
 libgdbm-compat4 (= 1.23-1),
 libgdbm6 (= 1.23-1),
 libgetopt-java (= 1.0.14+dfsg-6),
 libgfortran5 (= 12.1.0-7),
 libgif7 (= 5.2.1-2.5),
 libgkl-java (= 0.8.9+dfsg-4),
 libgl1 (= 1.4.0-1),
 libgl1-mesa-dri (= 22.2.0~rc1-1),
 libglapi-mesa (= 22.2.0~rc1-1),
 libglib2.0-0 (= 2.72.3-1+b1),
 libglvnd0 (= 1.4.0-1),
 libglx-mesa0 (= 22.2.0~rc1-1),
 libglx0 (= 1.4.0-1),
 libgmp10 (= 2:6.2.1+dfsg1-1),
 libgnutls30 (= 3.7.7-2),
 libgomp1 (= 12.1.0-7),
 libgoogle-gson-java (= 2.9.1-1),
 libgpg-error0 (= 1.45-2),
 libgprofng0 (= 2.38.90.20220713-2),
 libgraphite2-3 (= 1.3.14-1),
 libgssapi-krb5-2 (= 1.20-1),
 libguava-java (= 29.0-6),
 libharfbuzz0b (= 2.7.4-1+b1),
 libhogweed6 (= 3.7.3-1),
 libhtml-parser-perl (= 3.78-1),
 libhtml-tagset-perl (= 3.20-4),
 libhtml-tree-perl (= 5.07-2),
 libhts-dev (= 1.13+ds-2+b1),
 libhts3 (= 1.13+ds-2+b1),
 libhtscodecs2 (= 1.2.2-1),
 libhtsjdk-java (= 2.24.1+dfsg-3),
 libhttp-cookies-perl (= 6.10-1),
 libhttp-date-perl (= 6.05-1),
 libhttp-message-perl (= 6.37-1),
 libhttp-negotiate-perl (= 6.01-1),
 libhttpclient-java (= 4.5.13-3),
 libhttpcore-java (= 4.4.15-1),
 libice6 (= 2:1.0.10-1),
 libicu71 (= 71.1-3),
 libidn2-0 (= 2.3.3-1),
 libimport-into-perl (= 1.002005-2),
 libio-html-perl (= 1.004-3),
 libio-pty-perl (= 1:1.15-2+b1),
 libio-socket-ssl-perl (= 2.074-2),
 libipc-run-perl (= 20200505.0-1),
 libisl23 (= 0.25-1),
 libitm1 (= 12.1.0-7),
 libjbig0 (= 2.1-3.1+b2),
 libjellyfish-2.0-2 (= 2.3.0-14+b1),
 libjemalloc2 (= 5.2.1-4),
 libjoptsimple-java (= 5.0.4-4),
 libjpeg62-turbo (= 1:2.1.2-1),
 libjs-jquery (= 3.6.0+dfsg+~3.5.13-1),
 libjs-sphinxdoc (= 4.5.0-4),
 libjs-underscore (= 1.13.3~dfsg+~1.11.4-1),
 libjson-simple-java (= 2.3.0-1),
 libjsoncpp25 (= 1.9.5-4),
 libjsr305-java (= 0.1~+svn49-11),
 libjung-free-java (= 2.1.1-1),
 libk5crypto3 (= 1.20-1),
 libkeyutils1 (= 1.6.3-1),
 libkrb5-3 (= 1.20-1),
 libkrb5support0 (= 1.20-1),
 libksba8 (= 1.6.0-3),
 liblapack3 (= 3.10.1-2),
 liblcms2-2 (= 2.13.1-1),
 libldap-2.5-0 (= 2.5.12+dfsg-2),
 liblerc4 (= 4.0.0+ds-1),
 liblightcouch-java (= 0.0.6-1.1),
 libllvm14 (= 1:14.0.6-2),
 liblog4j2-java (= 2.17.2-1),
 liblsan0 (= 12.1.0-7),
 liblwp-mediatypes-perl (= 6.04-1),
 liblwp-protocol-https-perl (= 6.10-1),
 liblz4-1 (= 1.9.3-2),
 liblzma-dev (= 5.2.5-2.1),
 liblzma5 (= 5.2.5-2.1),
 libmagic-mgc (= 1:5.41-4),
 libmagic1 (= 1:5.41-4),
 libmd0 (= 1.0.4-2),
 libmodule-runtime-perl (= 0.016-2),
 libmongodb-java (= 3.6.3-2),
 libmoo-perl (= 2.005004-3),
 libmount1 (= 2.38.1-1),
 libmpc3 (= 1.2.1-2),
 libmpdec3 (= 2.5.1-2),
 libmpfr6 (= 4.1.0-3),
 libncurses6 (= 6.3+20220423-2),
 libncursesw6 (= 6.3+20220423-2),
 libnet-http-perl (= 6.22-1),
 libnet-ssleay-perl (= 1.92-2),
 libnettle8 (= 3.7.3-1),
 libnghttp2-14 (= 1.48.0-1),
 libngs-java (= 2.11.2-4),
 libngs-sdk-dev (= 2.11.2-4),
 libngs-sdk2 (= 2.11.2-4),
 libnpth0 (= 1.6-3),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libnspr4 (= 2:4.34-1),
 libnss3 (= 2:3.81-1),
 libp11-kit0 (= 0.24.1-1),
 libpam-modules (= 1.4.0-13),
 libpam-modules-bin (= 1.4.0-13),
 libpam-runtime (= 1.4.0-13),
 libpam0g (= 1.4.0-13),
 libpango-1.0-0 (= 1.50.7+ds-1),
 libpangocairo-1.0-0 (= 1.50.7+ds-1),
 libpangoft2-1.0-0 (= 1.50.7+ds-1),
 libpaper-utils (= 1.1.28+b1),
 libpaper1 (= 1.1.28+b1),
 libparams-classify-perl (= 0.015-2),
 libpcre2-8-0 (= 10.40-1),
 libpcre3 (= 2:8.39-14),
 libpcsclite1 (= 1.9.8-1),
 libperl5.34 (= 5.34.0-5),
 libpicard-java (= 2.27.2+dfsg-2),
 libpipeline1 (= 1.5.6-1),
 libpixman-1-0 (= 0.40.0-1),
 libpng16-16 (= 1.6.37-5),
 libprocps8 (= 2:3.3.17-7+b1),
 libpsl5 (= 0.21.0-1.2),
 libpython3-stdlib (= 3.10.5-3),
 libpython3.10-minimal (= 3.10.5-1),
 libpython3.10-stdlib (= 3.10.5-1),
 libquadmath0 (= 12.1.0-7),
 libreadline8 (= 8.1.2-1.2),
 libregexp-ipv6-perl (= 0.03-3),
 librhash0 (= 1.4.3-3),
 librole-tiny-perl (= 2.002004-1),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
 libsasl2-2 (= 2.1.28+dfsg-6),
 libsasl2-modules-db (= 2.1.28+dfsg-6),
 libseccomp2 (= 2.5.4-1+b1),
 libselinux1 (= 3.4-1+b1),
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 libsemanage2 (= 3.4-1+b1),
 libsensors-config (= 1:3.6.0-7),
 libsensors5 (= 1:3.6.0-7),
 libsepol2 (= 3.4-2),
 libsigsegv2 (= 2.14-1),
 libslf4j-java (= 1.7.32-1),
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 libsnappy-java (= 1.1.8.3-1),
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 libsqlite3-0 (= 3.39.2-1),
 libssh2-1 (= 1.10.0-3+b1),
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 libstdc++-11-dev (= 11.3.0-5),
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 libstdc++6 (= 12.1.0-7),
 libsub-override-perl (= 0.09-3),
 libsub-quote-perl (= 2.006006-1),
 libsystemd0 (= 251.3-1),
 libtasn1-6 (= 4.18.0-4),
 libtbb2 (= 2020.3-2.1),
 libtbbmalloc2 (= 2021.5.0-12),
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 libthai-data (= 0.1.29-1),
 libthai0 (= 0.1.29-1),
 libtiff5 (= 4.4.0-4),
 libtimedate-perl (= 2.3300-2),
 libtinfo6 (= 6.3+20220423-2),
 libtirpc-common (= 1.3.2-2.1),
 libtirpc-dev (= 1.3.2-2.1),
 libtirpc3 (= 1.3.2-2.1),
 libtk8.6 (= 8.6.12-1),
 libtool (= 2.4.7-4),
 libtry-tiny-perl (= 0.31-1),
 libtsan0 (= 11.3.0-5),
 libtsan2 (= 12.1.0-7),
 libubsan1 (= 12.1.0-7),
 libuchardet0 (= 0.0.7-1),
 libudev1 (= 251.3-1),
 libunistring2 (= 1.0-1),
 liburi-perl (= 5.12-1),
 libuuid1 (= 2.38.1-1),
 libuv1 (= 1.44.2-1),
 libwebp7 (= 1.2.2-2+b1),
 libwww-perl (= 6.67-1),
 libwww-robotrules-perl (= 6.02-1),
 libx11-6 (= 2:1.8.1-2),
 libx11-data (= 2:1.8.1-2),
 libx11-xcb1 (= 2:1.8.1-2),
 libxau6 (= 1:1.0.9-1),
 libxcb-dri2-0 (= 1.15-1),
 libxcb-dri3-0 (= 1.15-1),
 libxcb-glx0 (= 1.15-1),
 libxcb-present0 (= 1.15-1),
 libxcb-render0 (= 1.15-1),
 libxcb-shm0 (= 1.15-1),
 libxcb-sync1 (= 1.15-1),
 libxcb-xfixes0 (= 1.15-1),
 libxcb1 (= 1.15-1),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.4-1),
 libxfixes3 (= 1:6.0.0-1),
 libxft2 (= 2.3.4-1),
 libxi6 (= 2:1.8-1),
 libxml2 (= 2.9.14+dfsg-1+b1),
 libxrender1 (= 1:0.9.10-1.1),
 libxshmfence1 (= 1.3-1),
 libxss1 (= 1:1.2.3-1),
 libxt6 (= 1:1.2.1-1),
 libxtst6 (= 2:1.2.3-1.1),
 libxxf86vm1 (= 1:1.1.4-1+b2),
 libz3-4 (= 4.8.12-1+b1),
 libzstd1 (= 1.5.2+dfsg-1),
 linux-libc-dev (= 5.18.14-1),
 littler (= 0.3.15-1),
 login (= 1:4.11.1+dfsg1-2),
 lsb-base (= 11.2),
 m4 (= 1.4.18-5),
 make (= 4.3-4.1),
 man-db (= 2.10.2-1),
 mawk (= 1.3.4.20200120-3.1),
 media-types (= 8.0.0),
 ncurses-base (= 6.3+20220423-2),
 ncurses-bin (= 6.3+20220423-2),
 netbase (= 6.3),
 node-html5shiv (= 3.7.3+dfsg-4),
 openjdk-11-jdk (= 11.0.16+8-1),
 openjdk-11-jdk-headless (= 11.0.16+8-1),
 openjdk-11-jre (= 11.0.16+8-1),
 openjdk-11-jre-headless (= 11.0.16+8-1),
 openssl (= 3.0.5-1),
 parafly (= 0.1.0-3),
 passwd (= 1:4.11.1+dfsg1-2),
 patch (= 2.7.6-7),
 patchutils (= 0.4.2-1),
 perl (= 5.34.0-5),
 perl-base (= 5.34.0-5),
 perl-modules-5.34 (= 5.34.0-5),
 perl-openssl-defaults (= 7+b1),
 picard-tools (= 2.27.2+dfsg-2),
 pinentry-curses (= 1.2.0-2),
 po-debconf (= 1.0.21+nmu1),
 procps (= 2:3.3.17-7+b1),
 python3 (= 3.10.5-3),
 python3-hisat2 (= 2.2.1-3),
 python3-htseq (= 1.99.2-1+b1),
 python3-minimal (= 3.10.5-3),
 python3-numpy (= 1:1.21.5-1+b1),
 python3-pkg-resources (= 59.6.0-1.2),
 python3-pysam (= 0.17.0+ds-2+b2),
 python3.10 (= 3.10.5-1),
 python3.10-minimal (= 3.10.5-1),
 r-base-core (= 4.2.1-1),
 r-bioc-annotate (= 1.74.0+dfsg-1),
 r-bioc-annotationdbi (= 1.58.0-1),
 r-bioc-biobase (= 2.56.0-1),
 r-bioc-biocfilecache (= 2.4.0+dfsg-1),
 r-bioc-biocgenerics (= 0.42.0-1),
 r-bioc-biocio (= 1.6.0+dfsg-1),
 r-bioc-biocparallel (= 1.30.3-1),
 r-bioc-biomart (= 2.52.0+dfsg-1),
 r-bioc-biostrings (= 2.64.0-1),
 r-bioc-ctc (= 1.70.0-1),
 r-bioc-delayedarray (= 0.22.0+dfsg-1),
 r-bioc-deseq2 (= 1.36.0+dfsg-1),
 r-bioc-dexseq (= 1.42.0+dfsg-1),
 r-bioc-edger (= 3.38.2+dfsg-1),
 r-bioc-genefilter (= 1.78.0-1),
 r-bioc-genelendatabase (= 1.32.0-1),
 r-bioc-geneplotter (= 1.74.0-1),
 r-bioc-genomeinfodb (= 1.32.2-1),
 r-bioc-genomeinfodbdata (= 1.2.8-1),
 r-bioc-genomicalignments (= 1.32.1-1),
 r-bioc-genomicfeatures (= 1.48.3+dfsg-1),
 r-bioc-genomicranges (= 1.48.0+dfsg-1),
 r-bioc-go.db (= 3.15.0-1),
 r-bioc-goseq (= 1.48.0-1),
 r-bioc-iranges (= 2.30.0-1),
 r-bioc-keggrest (= 1.36.3+dfsg-1),
 r-bioc-limma (= 3.52.2+dfsg-1),
 r-bioc-matrixgenerics (= 1.8.1-1),
 r-bioc-qvalue (= 2.28.0-1),
 r-bioc-rhtslib (= 1.28.0+dfsg-1),
 r-bioc-rots (= 1.24.0-1),
 r-bioc-rsamtools (= 2.12.0-1),
 r-bioc-rtracklayer (= 1.56.1-1),
 r-bioc-s4vectors (= 0.34.0-1),
 r-bioc-summarizedexperiment (= 1.26.1+dfsg-1),
 r-bioc-tximport (= 1.24.0+dfsg-1),
 r-bioc-xvector (= 0.36.0-1),
 r-bioc-zlibbioc (= 1.42.0+dfsg-1),
 r-cran-amap (= 0.8-18-2+b1),
 r-cran-ape (= 5.6-2-1),
 r-cran-argparse (= 2.1.6+dfsg-1),
 r-cran-askpass (= 1.1-2),
 r-cran-assertthat (= 0.2.1-2),
 r-cran-bh (= 1.74.0-2),
 r-cran-biasedurn (= 1.07-4),
 r-cran-bit (= 4.0.4+dfsg-1),
 r-cran-bit64 (= 4.0.5-1),
 r-cran-bitops (= 1.0-7-1),
 r-cran-blob (= 1.2.3-1),
 r-cran-cachem (= 1.0.6-1),
 r-cran-catools (= 1.18.2-1),
 r-cran-cli (= 3.3.0-1),
 r-cran-clipr (= 0.8.0-1),
 r-cran-codetools (= 0.2-18-1),
 r-cran-colorspace (= 2.0-3+dfsg-1),
 r-cran-cpp11 (= 0.4.2-1),
 r-cran-crayon (= 1.5.1-1),
 r-cran-curl (= 4.3.2+dfsg-1),
 r-cran-dbi (= 1.1.3-1),
 r-cran-dbplyr (= 2.2.1+dfsg-1),
 r-cran-digest (= 0.6.29-1),
 r-cran-dplyr (= 1.0.9-1),
 r-cran-ellipsis (= 0.3.2-2),
 r-cran-fansi (= 1.0.3-1),
 r-cran-farver (= 2.1.1-1),
 r-cran-fastcluster (= 1.2.3-1+b2),
 r-cran-fastmap (= 1.1.0-1),
 r-cran-filelock (= 1.0.2-2),
 r-cran-findpython (= 1.0.7-1),
 r-cran-formatr (= 1.12-1),
 r-cran-futile.logger (= 1.4.3-4),
 r-cran-futile.options (= 1.0.1-3),
 r-cran-gdata (= 2.18.0.1-1),
 r-cran-generics (= 0.1.3-1),
 r-cran-ggplot2 (= 3.3.6+dfsg-1),
 r-cran-glue (= 1.6.2-1),
 r-cran-gplots (= 3.1.3-1),
 r-cran-gtable (= 0.3.0+dfsg-2),
 r-cran-gtools (= 3.9.3-1),
 r-cran-hms (= 1.1.1-1),
 r-cran-httr (= 1.4.3-1),
 r-cran-hwriter (= 1.3.2.1-1),
 r-cran-isoband (= 0.2.5-1),
 r-cran-jsonlite (= 1.8.0+dfsg-1),
 r-cran-kernsmooth (= 2.23-20-1),
 r-cran-labeling (= 0.4.2-1),
 r-cran-lambda.r (= 1.2.4-2),
 r-cran-lattice (= 0.20-45-3),
 r-cran-lifecycle (= 1.0.1-1),
 r-cran-littler (= 0.3.15-1),
 r-cran-locfit (= 1.5-9.6-1),
 r-cran-magrittr (= 2.0.3-1),
 r-cran-mass (= 7.3-58.1-1),
 r-cran-matrix (= 1.4-1-1),
 r-cran-matrixstats (= 0.62.0-1),
 r-cran-memoise (= 2.0.1-1),
 r-cran-mgcv (= 1.8-40-1),
 r-cran-mime (= 0.12-1),
 r-cran-munsell (= 0.5.0-2),
 r-cran-nlme (= 3.1.158-1),
 r-cran-openssl (= 2.0.2+dfsg-1),
 r-cran-pillar (= 1.8.0+dfsg-1),
 r-cran-pkgconfig (= 2.0.3-2),
 r-cran-pkgkitten (= 0.2.2-2),
 r-cran-plogr (= 0.2.0-3),
 r-cran-plyr (= 1.8.7-1),
 r-cran-png (= 0.1-7-4),
 r-cran-prettyunits (= 1.1.1-2),
 r-cran-progress (= 1.2.2-2),
 r-cran-purrr (= 0.3.4-1+b1),
 r-cran-r6 (= 2.5.1-1),
 r-cran-rappdirs (= 0.3.3-1),
 r-cran-rcolorbrewer (= 1.1-3-1),
 r-cran-rcpp (= 1.0.9-1),
 r-cran-rcpparmadillo (= 0.11.2.0.0-1),
 r-cran-rcurl (= 1.98-1.8+dfsg-1),
 r-cran-readr (= 2.1.2-1),
 r-cran-reshape2 (= 1.4.4-2),
 r-cran-restfulr (= 0.0.15-1),
 r-cran-rjson (= 0.2.21-1),
 r-cran-rlang (= 1.0.4-1),
 r-cran-rsqlite (= 2.2.15-1),
 r-cran-scales (= 1.2.0-2),
 r-cran-snow (= 1:0.4.4-2),
 r-cran-statmod (= 1.4.36-1),
 r-cran-stringi (= 1.7.8-1),
 r-cran-stringr (= 1.4.0-2),
 r-cran-survival (= 3.3-1-1+b1),
 r-cran-sys (= 3.4-1),
 r-cran-tibble (= 3.1.8+dfsg-1),
 r-cran-tidyselect (= 1.1.2+dfsg-1),
 r-cran-tzdb (= 0.3.0-1),
 r-cran-utf8 (= 1.2.2-1),
 r-cran-vctrs (= 0.4.1-2),
 r-cran-viridislite (= 0.4.0-2),
 r-cran-vroom (= 1.5.7-1),
 r-cran-withr (= 2.5.0-1),
 r-cran-xml (= 3.99-0.10-1),
 r-cran-xml2 (= 1.3.3-1),
 r-cran-xtable (= 1:1.8-4-2),
 r-cran-yaml (= 2.3.5-1),
 readline-common (= 8.1.2-1.2),
 rna-star (= 2.7.10a+dfsg-3),
 rpcsvc-proto (= 1.4.2-4),
 salmon (= 1.6.0+ds1-1),
 sed (= 4.8-1),
 sensible-utils (= 0.0.17),
 sgml-base (= 1.30),
 subread (= 2.0.3+dfsg-1),
 sysvinit-utils (= 3.04-1),
 tabix (= 1.13+ds-2+b1),
 tar (= 1.34+dfsg-1),
 tzdata (= 2022a-1),
 ucf (= 3.0043),
 unzip (= 6.0-27),
 util-linux (= 2.38.1-1),
 util-linux-extra (= 2.38.1-1),
 wdiff (= 1.2.2-2+b1),
 x11-common (= 1:7.7+23),
 xdg-utils (= 1.1.3-4.1),
 xz-utils (= 5.2.5-2.1),
 zip (= 3.0-12),
 zlib1g (= 1:1.2.11.dfsg-4),
 zlib1g-dev (= 1:1.2.11.dfsg-4)
Environment:
 DEB_BUILD_OPTIONS="buildinfo=+all reproducible=+all parallel=16"
 LANG="C"
 LC_ALL="C"
 SOURCE_DATE_EPOCH="1637009579"
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